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RETNLB (resistin like beta)

Identity

Alias_symbol (synonym)HXCP2
FIZZ2
RELMb
Other aliasFIZZ1
RELM-beta
RELMbeta
XCP2
HGNC (Hugo) RETNLB
LocusID (NCBI) 84666
Atlas_Id 46507
Location 3q13.13  [Link to chromosome band 3q13]
Location_base_pair Starts at 108474486 and ends at 108476130 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RETNLB   20388
Cards
Entrez_Gene (NCBI)RETNLB  84666  resistin like beta
AliasesFIZZ1; FIZZ2; HXCP2; RELM-beta; 
RELMb; RELMbeta; XCP2
GeneCards (Weizmann)RETNLB
Ensembl hg19 (Hinxton)ENSG00000163515 [Gene_View]  chr3:108474486-108476130 [Contig_View]  RETNLB [Vega]
Ensembl hg38 (Hinxton)ENSG00000163515 [Gene_View]  chr3:108474486-108476130 [Contig_View]  RETNLB [Vega]
ICGC DataPortalENSG00000163515
TCGA cBioPortalRETNLB
AceView (NCBI)RETNLB
Genatlas (Paris)RETNLB
WikiGenes84666
SOURCE (Princeton)RETNLB
Genetics Home Reference (NIH)RETNLB
Genomic and cartography
GoldenPath hg19 (UCSC)RETNLB  -     chr3:108474486-108476130 -  3q13.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RETNLB  -     3q13.13   [Description]    (hg38-Dec_2013)
EnsemblRETNLB - 3q13.13 [CytoView hg19]  RETNLB - 3q13.13 [CytoView hg38]
Mapping of homologs : NCBIRETNLB [Mapview hg19]  RETNLB [Mapview hg38]
OMIM605645   
Gene and transcription
Genbank (Entrez)AF290873 AF323084 AM050721 AY358655 BC069318
RefSeq transcript (Entrez)NM_032579
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)RETNLB
Cluster EST : UnigeneHs.307047 [ NCBI ]
CGAP (NCI)Hs.307047
Alternative Splicing GalleryENSG00000163515
Gene ExpressionRETNLB [ NCBI-GEO ]   RETNLB [ EBI - ARRAY_EXPRESS ]   RETNLB [ SEEK ]   RETNLB [ MEM ]
Gene Expression Viewer (FireBrowse)RETNLB [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84666
GTEX Portal (Tissue expression)RETNLB
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BQ08   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BQ08  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BQ08
Splice isoforms : SwissVarQ9BQ08
PhosPhoSitePlusQ9BQ08
Domains : Interpro (EBI)Resistin   
Domain families : Pfam (Sanger)Resistin (PF06954)   
Domain families : Pfam (NCBI)pfam06954   
Conserved Domain (NCBI)RETNLB
DMDM Disease mutations84666
Blocks (Seattle)RETNLB
SuperfamilyQ9BQ08
Human Protein AtlasENSG00000163515
Peptide AtlasQ9BQ08
HPRD05734
IPIIPI00000282   
Protein Interaction databases
DIP (DOE-UCLA)Q9BQ08
IntAct (EBI)Q9BQ08
FunCoupENSG00000163515
BioGRIDRETNLB
STRING (EMBL)RETNLB
ZODIACRETNLB
Ontologies - Pathways
QuickGOQ9BQ08
Ontology : AmiGOmolecular_function  hormone activity  cellular_component  extracellular space  cell proliferation  
Ontology : EGO-EBImolecular_function  hormone activity  cellular_component  extracellular space  cell proliferation  
NDEx NetworkRETNLB
Atlas of Cancer Signalling NetworkRETNLB
Wikipedia pathwaysRETNLB
Orthology - Evolution
OrthoDB84666
GeneTree (enSembl)ENSG00000163515
Phylogenetic Trees/Animal Genes : TreeFamRETNLB
HOVERGENQ9BQ08
HOGENOMQ9BQ08
Homologs : HomoloGeneRETNLB
Homology/Alignments : Family Browser (UCSC)RETNLB
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRETNLB [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RETNLB
dbVarRETNLB
ClinVarRETNLB
1000_GenomesRETNLB 
Exome Variant ServerRETNLB
ExAC (Exome Aggregation Consortium)RETNLB (select the gene name)
Genetic variants : HAPMAP84666
Genomic Variants (DGV)RETNLB [DGVbeta]
DECIPHER (Syndromes)3:108474486-108476130  ENSG00000163515
CONAN: Copy Number AnalysisRETNLB 
Mutations
ICGC Data PortalRETNLB 
TCGA Data PortalRETNLB 
Broad Tumor PortalRETNLB
OASIS PortalRETNLB [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRETNLB  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRETNLB
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RETNLB
DgiDB (Drug Gene Interaction Database)RETNLB
DoCM (Curated mutations)RETNLB (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RETNLB (select a term)
intoGenRETNLB
Cancer3DRETNLB(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605645   
Orphanet
MedgenRETNLB
Genetic Testing Registry RETNLB
NextProtQ9BQ08 [Medical]
TSGene84666
GENETestsRETNLB
Huge Navigator RETNLB [HugePedia]
snp3D : Map Gene to Disease84666
BioCentury BCIQRETNLB
ClinGenRETNLB
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84666
Chemical/Pharm GKB GenePA134906814
Clinical trialRETNLB
Miscellaneous
canSAR (ICR)RETNLB (select the gene name)
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRETNLB
EVEXRETNLB
GoPubMedRETNLB
iHOPRETNLB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:17:14 CEST 2017

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