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REXO1L1P (REXO1 like 1, pseudogene)

Identity

Alias (NCBI)GOR
REXO1L1
HGNC (Hugo) REXO1L1P
HGNC Alias symbGOR
HGNC Previous nameREXO1L1
HGNC Previous nameREX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1
 REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1, pseudogene
LocusID (NCBI) 254958
Atlas_Id 72586
Location 8q21.2  [Link to chromosome band 8q21]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PDE9A (21q22.3) / REXO1L1P (8q21.2)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 2 ]
  t(8;21)(q21;q22) PDE9A/REXO1L1P
t(8;21)(q21;q22) PDE9A/REXO1L1P


External links

 

Nomenclature
HGNC (Hugo)REXO1L1P   24660
Cards
Entrez_Gene (NCBI)REXO1L1P    REXO1 like 1, pseudogene
AliasesGOR; REXO1L1
GeneCards (Weizmann)REXO1L1P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  REXO1L1P [Vega]
TCGA cBioPortalREXO1L1P
AceView (NCBI)REXO1L1P
Genatlas (Paris)REXO1L1P
SOURCE (Princeton)REXO1L1P
Genetics Home Reference (NIH)REXO1L1P
Genomic and cartography
GoldenPath hg38 (UCSC)REXO1L1P  -  
GoldenPath hg19 (UCSC)REXO1L1P  -  
GoldenPathREXO1L1P - [CytoView hg19]  REXO1L1P - [CytoView hg38]
Genome Data Viewer NCBIREXO1L1P [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_172239
Consensus coding sequences : CCDS (NCBI)REXO1L1P
Gene ExpressionREXO1L1P [ NCBI-GEO ]   REXO1L1P [ EBI - ARRAY_EXPRESS ]   REXO1L1P [ SEEK ]   REXO1L1P [ MEM ]
Gene Expression Viewer (FireBrowse)REXO1L1P [ Firebrowse - Broad ]
GenevisibleExpression of REXO1L1P in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)254958
GTEX Portal (Tissue expression)REXO1L1P
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IX06   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IX06  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IX06
Catalytic activity : Enzyme3.1.-.- [ Enzyme-Expasy ]   3.1.-.-3.1.-.- [ IntEnz-EBI ]   3.1.-.- [ BRENDA ]   3.1.-.- [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusQ8IX06
Domains : Interpro (EBI)EloA-BP1    Exonuclease_RNaseT/DNA_pol3    REX1-like_exo    RNaseH-like_sf    RNaseH_sf   
Domain families : Pfam (Sanger)EloA-BP1 (PF15870)   
Domain families : Pfam (NCBI)pfam15870   
Domain families : Smart (EMBL)EXOIII (SM00479)  
Conserved Domain (NCBI)REXO1L1P
SuperfamilyQ8IX06
AlphaFold pdb e-kbQ8IX06   
HPRD17049
Protein Interaction databases
DIP (DOE-UCLA)Q8IX06
IntAct (EBI)Q8IX06
BioGRIDREXO1L1P
STRING (EMBL)REXO1L1P
ZODIACREXO1L1P
Ontologies - Pathways
QuickGOQ8IX06
Ontology : AmiGOnucleic acid binding  exonuclease activity  protein binding  nucleus  cytoplasm  nucleic acid phosphodiester bond hydrolysis  
Ontology : EGO-EBInucleic acid binding  exonuclease activity  protein binding  nucleus  cytoplasm  nucleic acid phosphodiester bond hydrolysis  
NDEx NetworkREXO1L1P
Atlas of Cancer Signalling NetworkREXO1L1P
Wikipedia pathwaysREXO1L1P
Orthology - Evolution
OrthoDB254958
Phylogenetic Trees/Animal Genes : TreeFamREXO1L1P
Homologs : HomoloGeneREXO1L1P
Homology/Alignments : Family Browser (UCSC)REXO1L1P
Gene fusions - Rearrangements
Fusion : QuiverREXO1L1P
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerREXO1L1P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)REXO1L1P
dbVarREXO1L1P
ClinVarREXO1L1P
MonarchREXO1L1P
1000_GenomesREXO1L1P 
Exome Variant ServerREXO1L1P
Varsome BrowserREXO1L1P
ACMGREXO1L1P variants
VarityQ8IX06
Genomic Variants (DGV)REXO1L1P [DGVbeta]
DECIPHERREXO1L1P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisREXO1L1P 
Mutations
ICGC Data PortalREXO1L1P 
TCGA Data PortalREXO1L1P 
Broad Tumor PortalREXO1L1P
OASIS PortalREXO1L1P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDREXO1L1P
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaREXO1L1P
DgiDB (Drug Gene Interaction Database)REXO1L1P
DoCM (Curated mutations)REXO1L1P
CIViC (Clinical Interpretations of Variants in Cancer)REXO1L1P
Cancer3DREXO1L1P
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETREXO1L1P
MedgenREXO1L1P
Genetic Testing Registry REXO1L1P
NextProtQ8IX06 [Medical]
GENETestsREXO1L1P
Target ValidationREXO1L1P
Huge Navigator REXO1L1P [HugePedia]
ClinGenREXO1L1P
Clinical trials, drugs, therapy
MyCancerGenomeREXO1L1P
Protein Interactions : CTDREXO1L1P
Pharm GKB GenePA142671078
PharosQ8IX06
Clinical trialREXO1L1P
Miscellaneous
canSAR (ICR)REXO1L1P
HarmonizomeREXO1L1P
DataMed IndexREXO1L1P
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXREXO1L1P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:18:15 CEST 2021

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