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RGL1 (ral guanine nucleotide dissociation stimulator-like 1)

Identity

Other namesRGL
HGNC (Hugo) RGL1
LocusID (NCBI) 23179
Location 1q25.3
Location_base_pair Starts at 183605208 and ends at 183897666 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)RGL1   30281
Entrez_Gene (NCBI)RGL1  23179  ral guanine nucleotide dissociation stimulator-like 1
Cards
GeneCards (Weizmann)RGL1
Ensembl (Hinxton)ENSG00000143344 [Gene_View]  chr1:183605208-183897666 [Contig_View]  RGL1 [Vega]
AceView (NCBI)RGL1
Genatlas (Paris)RGL1
SOURCE (Stanford)NM_015149
Genomic and cartography
GoldenPath (UCSC)RGL1  -  1q25.3   chr1:183605208-183897666 +  1q25.3   [Description]    (hg19-Feb_2009)
EnsemblRGL1 - 1q25.3 [CytoView]
Mapping of homologs : NCBIRGL1 [Mapview]
OMIM605667   
Gene and transcription
Genbank (Entrez)AB023176 AF186779 AF186780 AK295179 AK295611
RefSeq transcript (SRS)NM_015149
RefSeq transcript (Entrez)NM_015149
RefSeq genomic (SRS)AC_000133 NC_000001 NC_018912 NT_004487 NW_001838533 NW_004077999
RefSeq genomic (Entrez)AC_000133 NC_000001 NC_018912 NT_004487 NW_001838533 NW_004077999
Consensus coding sequences : CCDS (NCBI)RGL1
Cluster EST : UnigeneHs.497148 [ SRS ] Hs.497148 [ NCBI ]
CGAP (NCI)Hs.497148
Alternative Splicing : Fast-db (Paris)GSHG0001261
Alternative Splicing GalleryENSG00000143344
Gene ExpressionRGL1 [ NCBI-GEO ]   RGL1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NZL6 (SRS) Q9NZL6 (Uniprot)
NextProtQ9NZL6
With graphics : InterProQ9NZL6
Splice isoforms : SwissVarQ9NZL6(Swissvar)
Domaine pattern : Prosite (SRS)RA (PS50200)    RASGEF (PS00720)    RASGEF_CAT (PS50009)    RASGEF_NTER (PS50212)   
Domaine pattern : Prosite (Expaxy)RA (PS50200)    RASGEF (PS00720)    RASGEF_CAT (PS50009)    RASGEF_NTER (PS50212)   
Domains : Interpro (SRS)Ras-assoc    Ras-like_Gua-exchang_fac_N    Ras_G-nucl-exch_fac_CS    Ras_GEF    Ras_GEF_dom    RasGRF_CDC25   
Domains : Interpro (EBI)Ras-assoc    Ras-like_Gua-exchang_fac_N    Ras_G-nucl-exch_fac_CS    Ras_GEF    Ras_GEF_dom    RasGRF_CDC25   
Related proteins : CluSTrQ9NZL6
Domain families : Pfam (SRS)RA (PF00788)    RasGEF (PF00617)    RasGEF_N (PF00618)   
Domain families : Pfam (Sanger)RA (PF00788)    RasGEF (PF00617)    RasGEF_N (PF00618)   
Domain families : Pfam (NCBI)pfam00788    pfam00617    pfam00618   
Domain families : Smart (EMBL)RA (SM00314)  RasGEF (SM00147)  RasGEFN (SM00229)  
DMDM23179
Blocks (Seattle)Q9NZL6
Human Protein AtlasENSG00000143344
HPRD12032
IPIIPI00396431   IPI00299679   IPI01015431   IPI01012921   IPI00922151   
Protein Interaction databases
DIP (DOE-UCLA)Q9NZL6
IntAct (EBI)Q9NZL6
FunCoupENSG00000143344
REACTOMERGL1
Protein Interaction Database23179
BioGRIDRGL1
InParanoidQ9NZL6
Interologous Interaction database Q9NZL6
IntegromeDBRGL1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)RGL1
SNP (GeneSNP Utah)RGL1
SNP : HGBaseRGL1
Genetic variants : HAPMAPRGL1
Somatic Mutations in Cancer : COSMICRGL1 
CONAN: Copy Number AnalysisRGL1 
Mutations and Diseases : HGMDRGL1
OMIM605667   
GENETests605667   
Disease Genetic AssociationRGL1
Huge Navigator RGL1 [HugePedia]  RGL1 [HugeCancerGEM]
Genomic VariantsRGL1  RGL1 [DGVbeta]
snp3D : Map Gene to Disease23179
General knowledge
Homologs : HomoloGeneRGL1
Homology/Alignments : Family Browser (UCSC)RGL1
Phylogenetic Trees/Animal Genes : TreeFamRGL1
Chemical/Protein Interactions : CTD23179
Chemical/Pharm GKB GenePA134934636
Clinical trialRGL1
Cancer Resource (Charite)ENSG00000143344
Ontology : AmiGOcellular_component  cytosol  small GTPase mediated signal transduction  Ral guanyl-nucleotide exchange factor activity  cellular lipid metabolic process  small molecule metabolic process  regulation of small GTPase mediated signal transduction  
Ontology : EGO-EBIcellular_component  cytosol  small GTPase mediated signal transduction  Ral guanyl-nucleotide exchange factor activity  cellular lipid metabolic process  small molecule metabolic process  regulation of small GTPase mediated signal transduction  
Other databases
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
PubGeneRGL1
iHOPRGL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:22:39 CEST 2013
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