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RGL3 (ral guanine nucleotide dissociation stimulator-like 3)

Identity

Other names-
HGNC (Hugo) RGL3
LocusID (NCBI) 57139
Location 19p13.2
Location_base_pair Starts at 11504732 and ends at 11530018 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)RGL3   30282
Cards
Entrez_Gene (NCBI)RGL3  57139  ral guanine nucleotide dissociation stimulator-like 3
GeneCards (Weizmann)RGL3
Ensembl (Hinxton)ENSG00000205517 [Gene_View]  chr19:11504732-11530018 [Contig_View]  RGL3 [Vega]
ICGC DataPortalENSG00000205517
cBioPortalRGL3
AceView (NCBI)RGL3
Genatlas (Paris)RGL3
WikiGenes57139
SOURCE (Princeton)NM_001035223 NM_001161616
Genomic and cartography
GoldenPath (UCSC)RGL3  -  19p13.2   chr19:11504732-11530018 -  19p13.2   [Description]    (hg19-Feb_2009)
EnsemblRGL3 - 19p13.2 [CytoView]
Mapping of homologs : NCBIRGL3 [Mapview]
Gene and transcription
Genbank (Entrez)AK057147 AK096811 AK126263 AK293404 AK298281
RefSeq transcript (Entrez)NM_001035223 NM_001161616
RefSeq genomic (Entrez)AC_000151 NC_000019 NC_018930 NT_011295 NW_001838483 NW_004929414
Consensus coding sequences : CCDS (NCBI)RGL3
Cluster EST : UnigeneHs.375142 [ NCBI ]
CGAP (NCI)Hs.375142
Alternative Splicing : Fast-db (Paris)GSHG0015513
Alternative Splicing GalleryENSG00000205517
Gene ExpressionRGL3 [ NCBI-GEO ]     RGL3 [ SEEK ]   RGL3 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3MIN7 (Uniprot)
NextProtQ3MIN7  [Medical]
With graphics : InterProQ3MIN7
Splice isoforms : SwissVarQ3MIN7 (Swissvar)
Domaine pattern : Prosite (Expaxy)RA (PS50200)    RASGEF (PS00720)    RASGEF_CAT (PS50009)    RASGEF_NTER (PS50212)   
Domains : Interpro (EBI)Ras-assoc [organisation]   Ras-like_Gua-exchang_fac_N [organisation]   Ras_G-nucl-exch_fac_CS [organisation]   Ras_GEF_dom [organisation]   RasGRF_CDC25 [organisation]   Ubiquitin-rel_dom [organisation]  
Related proteins : CluSTrQ3MIN7
Domain families : Pfam (Sanger)RA (PF00788)    RasGEF (PF00617)    RasGEF_N (PF00618)   
Domain families : Pfam (NCBI)pfam00788    pfam00617    pfam00618   
Domain families : Smart (EMBL)RA (SM00314)  RasGEF (SM00147)  RasGEFN (SM00229)  
DMDM Disease mutations57139
Blocks (Seattle)Q3MIN7
Human Protein AtlasENSG00000205517 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasQ3MIN7
IPIIPI00643373   IPI00641225   IPI00908940   IPI00930050   IPI00747325   
Protein Interaction databases
DIP (DOE-UCLA)Q3MIN7
IntAct (EBI)Q3MIN7
FunCoupENSG00000205517
BioGRIDRGL3
InParanoidQ3MIN7
Interologous Interaction database Q3MIN7
IntegromeDBRGL3
STRING (EMBL)RGL3
Ontologies - Pathways
Ontology : AmiGOintracellular  small GTPase mediated signal transduction  Ral guanyl-nucleotide exchange factor activity  Ras GTPase binding  positive regulation of Ral GTPase activity  
Ontology : EGO-EBIintracellular  small GTPase mediated signal transduction  Ral guanyl-nucleotide exchange factor activity  Ras GTPase binding  positive regulation of Ral GTPase activity  
Protein Interaction DatabaseRGL3
Wikipedia pathwaysRGL3
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)RGL3
snp3D : Map Gene to Disease57139
SNP (GeneSNP Utah)RGL3
SNP : HGBaseRGL3
Genetic variants : HAPMAPRGL3
Exome VariantRGL3
1000_GenomesRGL3 
ICGC programENSG00000205517 
Somatic Mutations in Cancer : COSMICRGL3 
CONAN: Copy Number AnalysisRGL3 
Mutations and Diseases : HGMDRGL3
Mutations and Diseases : intOGenRGL3
Genomic VariantsRGL3  RGL3 [DGVbeta]
dbVarRGL3
ClinVarRGL3
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM
MedgenRGL3
GENETestsRGL3
Disease Genetic AssociationRGL3
Huge Navigator RGL3 [HugePedia]  RGL3 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneRGL3
Homology/Alignments : Family Browser (UCSC)RGL3
Phylogenetic Trees/Animal Genes : TreeFamRGL3
Chemical/Protein Interactions : CTD57139
Chemical/Pharm GKB GenePA134979213
Clinical trialRGL3
Cancer Resource (Charite)ENSG00000205517
Other databases
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
CoreMineRGL3
iHOPRGL3
OncoSearchRGL3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 26 17:02:50 CEST 2014

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