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RGL4 (ral guanine nucleotide dissociation stimulator like 4)

Identity

Alias_symbol (synonym)Rgr
Other alias
HGNC (Hugo) RGL4
LocusID (NCBI) 266747
Atlas_Id 43464
Location 22q11.23  [Link to chromosome band 22q11]
Location_base_pair Starts at 23690861 and ends at 23699176 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RGL4   31911
Cards
Entrez_Gene (NCBI)RGL4  266747  ral guanine nucleotide dissociation stimulator like 4
AliasesRgr
GeneCards (Weizmann)RGL4
Ensembl hg19 (Hinxton)ENSG00000159496 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000159496 [Gene_View]  chr22:23690861-23699176 [Contig_View]  RGL4 [Vega]
ICGC DataPortalENSG00000159496
TCGA cBioPortalRGL4
AceView (NCBI)RGL4
Genatlas (Paris)RGL4
WikiGenes266747
SOURCE (Princeton)RGL4
Genetics Home Reference (NIH)RGL4
Genomic and cartography
GoldenPath hg38 (UCSC)RGL4  -     chr22:23690861-23699176 +  22q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RGL4  -     22q11.23   [Description]    (hg19-Feb_2009)
EnsemblRGL4 - 22q11.23 [CytoView hg19]  RGL4 - 22q11.23 [CytoView hg38]
Mapping of homologs : NCBIRGL4 [Mapview hg19]  RGL4 [Mapview hg38]
OMIM612214   
Gene and transcription
Genbank (Entrez)AK131340 AY101396 BC047947 BC101108 BC101109
RefSeq transcript (Entrez)NM_001329424 NM_001329425 NM_153615
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RGL4
Cluster EST : UnigeneHs.658997 [ NCBI ]
CGAP (NCI)Hs.658997
Alternative Splicing GalleryENSG00000159496
Gene ExpressionRGL4 [ NCBI-GEO ]   RGL4 [ EBI - ARRAY_EXPRESS ]   RGL4 [ SEEK ]   RGL4 [ MEM ]
Gene Expression Viewer (FireBrowse)RGL4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)266747
GTEX Portal (Tissue expression)RGL4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IZJ4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IZJ4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IZJ4
Splice isoforms : SwissVarQ8IZJ4
PhosPhoSitePlusQ8IZJ4
Domaine pattern : Prosite (Expaxy)RASGEF_CAT (PS50009)   
Domains : Interpro (EBI)Ras_GEF_dom    RASGEF_cat_dom   
Domain families : Pfam (Sanger)RasGEF (PF00617)   
Domain families : Pfam (NCBI)pfam00617   
Domain families : Smart (EMBL)RasGEF (SM00147)  
Conserved Domain (NCBI)RGL4
DMDM Disease mutations266747
Blocks (Seattle)RGL4
SuperfamilyQ8IZJ4
Human Protein AtlasENSG00000159496
Peptide AtlasQ8IZJ4
HPRD11528
IPIIPI00744438   IPI00643388   IPI00647817   IPI00442194   IPI00879590   IPI00879965   
Protein Interaction databases
DIP (DOE-UCLA)Q8IZJ4
IntAct (EBI)Q8IZJ4
FunCoupENSG00000159496
BioGRIDRGL4
STRING (EMBL)RGL4
ZODIACRGL4
Ontologies - Pathways
QuickGOQ8IZJ4
Ontology : AmiGOguanyl-nucleotide exchange factor activity  small GTPase mediated signal transduction  cytoplasmic vesicle  positive regulation of GTPase activity  
Ontology : EGO-EBIguanyl-nucleotide exchange factor activity  small GTPase mediated signal transduction  cytoplasmic vesicle  positive regulation of GTPase activity  
NDEx NetworkRGL4
Atlas of Cancer Signalling NetworkRGL4
Wikipedia pathwaysRGL4
Orthology - Evolution
OrthoDB266747
GeneTree (enSembl)ENSG00000159496
Phylogenetic Trees/Animal Genes : TreeFamRGL4
HOVERGENQ8IZJ4
HOGENOMQ8IZJ4
Homologs : HomoloGeneRGL4
Homology/Alignments : Family Browser (UCSC)RGL4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRGL4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RGL4
dbVarRGL4
ClinVarRGL4
1000_GenomesRGL4 
Exome Variant ServerRGL4
ExAC (Exome Aggregation Consortium)RGL4 (select the gene name)
Genetic variants : HAPMAP266747
Genomic Variants (DGV)RGL4 [DGVbeta]
DECIPHERRGL4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRGL4 
Mutations
ICGC Data PortalRGL4 
TCGA Data PortalRGL4 
Broad Tumor PortalRGL4
OASIS PortalRGL4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRGL4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRGL4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RGL4
DgiDB (Drug Gene Interaction Database)RGL4
DoCM (Curated mutations)RGL4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RGL4 (select a term)
intoGenRGL4
Cancer3DRGL4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612214   
Orphanet
MedgenRGL4
Genetic Testing Registry RGL4
NextProtQ8IZJ4 [Medical]
TSGene266747
GENETestsRGL4
Target ValidationRGL4
Huge Navigator RGL4 [HugePedia]
snp3D : Map Gene to Disease266747
BioCentury BCIQRGL4
ClinGenRGL4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD266747
Chemical/Pharm GKB GenePA162401277
Clinical trialRGL4
Miscellaneous
canSAR (ICR)RGL4 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRGL4
EVEXRGL4
GoPubMedRGL4
iHOPRGL4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:53:06 CEST 2017

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