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RGL4 (ral guanine nucleotide dissociation stimulator-like 4)

Identity

Other namesRgr
HGNC (Hugo) RGL4
LocusID (NCBI) 266747
Location 22q11.23
Location_base_pair Starts at 24033048 and ends at 24041363 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)RGL4   31911
Entrez_Gene (NCBI)RGL4  266747  ral guanine nucleotide dissociation stimulator-like 4
Cards
GeneCards (Weizmann)RGL4
Ensembl (Hinxton)ENSG00000159496 [Gene_View]  chr22:24033048-24041363 [Contig_View]  RGL4 [Vega]
AceView (NCBI)RGL4
Genatlas (Paris)RGL4
SOURCE (Stanford)NM_153615
Genomic and cartography
GoldenPath (UCSC)RGL4  -  22q11.23   chr22:24033048-24041363 +  22q11.23   [Description]    (hg19-Feb_2009)
EnsemblRGL4 - 22q11.23 [CytoView]
Mapping of homologs : NCBIRGL4 [Mapview]
OMIM612214   
Gene and transcription
Genbank (Entrez)AK131340 AY101396 BC101108 BC101109 BC101110
RefSeq transcript (SRS)NM_153615
RefSeq transcript (Entrez)NM_153615
RefSeq genomic (SRS)AC_000154 NC_000022 NC_018933 NT_011520 NW_001838745 NW_004078112
RefSeq genomic (Entrez)AC_000154 NC_000022 NC_018933 NT_011520 NW_001838745 NW_004078112
Consensus coding sequences : CCDS (NCBI)RGL4
Cluster EST : UnigeneHs.658997 [ SRS ] Hs.658997 [ NCBI ]
CGAP (NCI)Hs.658997
Alternative Splicing : Fast-db (Paris)GSHG0019875
Alternative Splicing GalleryENSG00000159496
Gene ExpressionRGL4 [ NCBI-GEO ]   RGL4 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IZJ4 (SRS) Q8IZJ4 (Uniprot)
NextProtQ8IZJ4
With graphics : InterProQ8IZJ4
Splice isoforms : SwissVarQ8IZJ4(Swissvar)
Domaine pattern : Prosite (SRS)RASGEF (PS00720)    RASGEF_CAT (PS50009)   
Domaine pattern : Prosite (Expaxy)RASGEF (PS00720)    RASGEF_CAT (PS50009)   
Domains : Interpro (SRS)Ras_GEF    Ras_GEF_dom    RasGRF_CDC25   
Domains : Interpro (EBI)Ras_GEF    Ras_GEF_dom    RasGRF_CDC25   
Related proteins : CluSTrQ8IZJ4
Domain families : Pfam (SRS)RasGEF (PF00617)   
Domain families : Pfam (Sanger)RasGEF (PF00617)   
Domain families : Pfam (NCBI)pfam00617   
Domain families : Smart (EMBL)RasGEF (SM00147)  
DMDM266747
Blocks (Seattle)Q8IZJ4
Human Protein AtlasENSG00000159496
HPRD11528
IPIIPI00744438   IPI00643388   IPI00647817   IPI00442194   IPI00879590   IPI00879965   
Protein Interaction databases
DIP (DOE-UCLA)Q8IZJ4
IntAct (EBI)Q8IZJ4
FunCoupENSG00000159496
REACTOMERGL4
Protein Interaction Database266747
BioGRIDRGL4
InParanoidQ8IZJ4
Interologous Interaction database Q8IZJ4
IntegromeDBRGL4
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)RGL4
SNP (GeneSNP Utah)RGL4
SNP : HGBaseRGL4
Genetic variants : HAPMAPRGL4
Somatic Mutations in Cancer : COSMICRGL4 
CONAN: Copy Number AnalysisRGL4 
Mutations and Diseases : HGMDRGL4
OMIM612214   
GENETests612214   
Disease Genetic AssociationRGL4
Huge Navigator RGL4 [HugePedia]  RGL4 [HugeCancerGEM]
Genomic VariantsRGL4  RGL4 [DGVbeta]
snp3D : Map Gene to Disease266747
General knowledge
Homologs : HomoloGeneRGL4
Homology/Alignments : Family Browser (UCSC)RGL4
Phylogenetic Trees/Animal Genes : TreeFamRGL4
Chemical/Protein Interactions : CTD266747
Chemical/Pharm GKB GenePA162401277
Clinical trialRGL4
Cancer Resource (Charite)ENSG00000159496
Ontology : AmiGOguanyl-nucleotide exchange factor activity  small GTPase mediated signal transduction  cytoplasmic membrane-bounded vesicle  
Ontology : EGO-EBIguanyl-nucleotide exchange factor activity  small GTPase mediated signal transduction  cytoplasmic membrane-bounded vesicle  
Other databases
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
PubGeneRGL4
iHOPRGL4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:22:46 CEST 2013
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