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RGS10 (regulator of G-protein signaling 10)

Identity

Alias_namesregulator of G-protein signalling 10
Other alias-
HGNC (Hugo) RGS10
LocusID (NCBI) 6001
Atlas_Id 47421
Location 10q26.11  [Link to chromosome band 10q26]
Location_base_pair Starts at 121259339 and ends at 121302222 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
RGS10 (10q26.11) / RGS10 (10q26.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RGS10   9992
Cards
Entrez_Gene (NCBI)RGS10  6001  regulator of G-protein signaling 10
Aliases
GeneCards (Weizmann)RGS10
Ensembl hg19 (Hinxton)ENSG00000148908 [Gene_View]  chr10:121259339-121302222 [Contig_View]  RGS10 [Vega]
Ensembl hg38 (Hinxton)ENSG00000148908 [Gene_View]  chr10:121259339-121302222 [Contig_View]  RGS10 [Vega]
ICGC DataPortalENSG00000148908
TCGA cBioPortalRGS10
AceView (NCBI)RGS10
Genatlas (Paris)RGS10
WikiGenes6001
SOURCE (Princeton)RGS10
Genetics Home Reference (NIH)RGS10
Genomic and cartography
GoldenPath hg19 (UCSC)RGS10  -     chr10:121259339-121302222 -  10q26.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RGS10  -     10q26.11   [Description]    (hg38-Dec_2013)
EnsemblRGS10 - 10q26.11 [CytoView hg19]  RGS10 - 10q26.11 [CytoView hg38]
Mapping of homologs : NCBIRGS10 [Mapview hg19]  RGS10 [Mapview hg38]
OMIM602856   
Gene and transcription
Genbank (Entrez)AF045229 AF368902 AF493934 AI219612 AK290773
RefSeq transcript (Entrez)NM_001005339 NM_002925
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)RGS10
Cluster EST : UnigeneHs.501200 [ NCBI ]
CGAP (NCI)Hs.501200
Alternative Splicing GalleryENSG00000148908
Gene ExpressionRGS10 [ NCBI-GEO ]   RGS10 [ EBI - ARRAY_EXPRESS ]   RGS10 [ SEEK ]   RGS10 [ MEM ]
Gene Expression Viewer (FireBrowse)RGS10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6001
GTEX Portal (Tissue expression)RGS10
Protein : pattern, domain, 3D structure
UniProt/SwissProtO43665   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO43665  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO43665
Splice isoforms : SwissVarO43665
PhosPhoSitePlusO43665
Domaine pattern : Prosite (Expaxy)RGS (PS50132)   
Domains : Interpro (EBI)RGS    RGS_subdom1   
Domain families : Pfam (Sanger)RGS (PF00615)   
Domain families : Pfam (NCBI)pfam00615   
Domain families : Smart (EMBL)RGS (SM00315)  
Conserved Domain (NCBI)RGS10
DMDM Disease mutations6001
Blocks (Seattle)RGS10
PDB (SRS)2DLR    2I59    2IHB   
PDB (PDBSum)2DLR    2I59    2IHB   
PDB (IMB)2DLR    2I59    2IHB   
PDB (RSDB)2DLR    2I59    2IHB   
Structural Biology KnowledgeBase2DLR    2I59    2IHB   
SCOP (Structural Classification of Proteins)2DLR    2I59    2IHB   
CATH (Classification of proteins structures)2DLR    2I59    2IHB   
SuperfamilyO43665
Human Protein AtlasENSG00000148908
Peptide AtlasO43665
HPRD04172
IPIIPI00013454   IPI00216532   IPI00643554   
Protein Interaction databases
DIP (DOE-UCLA)O43665
IntAct (EBI)O43665
FunCoupENSG00000148908
BioGRIDRGS10
STRING (EMBL)RGS10
ZODIACRGS10
Ontologies - Pathways
QuickGOO43665
Ontology : AmiGOG-protein alpha-subunit binding  GTPase activator activity  nucleus  cytosol  plasma membrane  G-protein coupled acetylcholine receptor signaling pathway  negative regulation of signal transduction  positive regulation of GTPase activity  
Ontology : EGO-EBIG-protein alpha-subunit binding  GTPase activator activity  nucleus  cytosol  plasma membrane  G-protein coupled acetylcholine receptor signaling pathway  negative regulation of signal transduction  positive regulation of GTPase activity  
NDEx NetworkRGS10
Atlas of Cancer Signalling NetworkRGS10
Wikipedia pathwaysRGS10
Orthology - Evolution
OrthoDB6001
GeneTree (enSembl)ENSG00000148908
Phylogenetic Trees/Animal Genes : TreeFamRGS10
HOVERGENO43665
HOGENOMO43665
Homologs : HomoloGeneRGS10
Homology/Alignments : Family Browser (UCSC)RGS10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRGS10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RGS10
dbVarRGS10
ClinVarRGS10
1000_GenomesRGS10 
Exome Variant ServerRGS10
ExAC (Exome Aggregation Consortium)RGS10 (select the gene name)
Genetic variants : HAPMAP6001
Genomic Variants (DGV)RGS10 [DGVbeta]
DECIPHER (Syndromes)10:121259339-121302222  ENSG00000148908
CONAN: Copy Number AnalysisRGS10 
Mutations
ICGC Data PortalRGS10 
TCGA Data PortalRGS10 
Broad Tumor PortalRGS10
OASIS PortalRGS10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRGS10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRGS10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RGS10
DgiDB (Drug Gene Interaction Database)RGS10
DoCM (Curated mutations)RGS10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RGS10 (select a term)
intoGenRGS10
Cancer3DRGS10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602856   
Orphanet
MedgenRGS10
Genetic Testing Registry RGS10
NextProtO43665 [Medical]
TSGene6001
GENETestsRGS10
Huge Navigator RGS10 [HugePedia]
snp3D : Map Gene to Disease6001
BioCentury BCIQRGS10
ClinGenRGS10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6001
Chemical/Pharm GKB GenePA34362
Clinical trialRGS10
Miscellaneous
canSAR (ICR)RGS10 (select the gene name)
Probes
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRGS10
EVEXRGS10
GoPubMedRGS10
iHOPRGS10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:17:20 CEST 2017

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