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RGS18 (regulator of G protein signaling 18)

Identity

Alias_namesregulator of G-protein signalling 18
Alias_symbol (synonym)RGS13
Other alias
HGNC (Hugo) RGS18
LocusID (NCBI) 64407
Atlas_Id 47147
Location 1q31.2  [Link to chromosome band 1q31]
Location_base_pair Starts at 192158462 and ends at 192185815 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RGS18   14261
Cards
Entrez_Gene (NCBI)RGS18  64407  regulator of G protein signaling 18
AliasesRGS13
GeneCards (Weizmann)RGS18
Ensembl hg19 (Hinxton)ENSG00000150681 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000150681 [Gene_View]  chr1:192158462-192185815 [Contig_View]  RGS18 [Vega]
ICGC DataPortalENSG00000150681
TCGA cBioPortalRGS18
AceView (NCBI)RGS18
Genatlas (Paris)RGS18
WikiGenes64407
SOURCE (Princeton)RGS18
Genetics Home Reference (NIH)RGS18
Genomic and cartography
GoldenPath hg38 (UCSC)RGS18  -     chr1:192158462-192185815 +  1q31.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RGS18  -     1q31.2   [Description]    (hg19-Feb_2009)
EnsemblRGS18 - 1q31.2 [CytoView hg19]  RGS18 - 1q31.2 [CytoView hg38]
Mapping of homologs : NCBIRGS18 [Mapview hg19]  RGS18 [Mapview hg38]
OMIM607192   
Gene and transcription
Genbank (Entrez)AF076642 AF268036 AK057114 AK292015 AK315377
RefSeq transcript (Entrez)NM_130782
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RGS18
Cluster EST : UnigeneHs.440890 [ NCBI ]
CGAP (NCI)Hs.440890
Alternative Splicing GalleryENSG00000150681
Gene ExpressionRGS18 [ NCBI-GEO ]   RGS18 [ EBI - ARRAY_EXPRESS ]   RGS18 [ SEEK ]   RGS18 [ MEM ]
Gene Expression Viewer (FireBrowse)RGS18 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64407
GTEX Portal (Tissue expression)RGS18
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NS28   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NS28  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NS28
Splice isoforms : SwissVarQ9NS28
PhosPhoSitePlusQ9NS28
Domaine pattern : Prosite (Expaxy)RGS (PS50132)   
Domains : Interpro (EBI)RGS    RGS_subdom1   
Domain families : Pfam (Sanger)RGS (PF00615)   
Domain families : Pfam (NCBI)pfam00615   
Domain families : Smart (EMBL)RGS (SM00315)  
Conserved Domain (NCBI)RGS18
DMDM Disease mutations64407
Blocks (Seattle)RGS18
PDB (SRS)2DLV    2JM5    2OWI   
PDB (PDBSum)2DLV    2JM5    2OWI   
PDB (IMB)2DLV    2JM5    2OWI   
PDB (RSDB)2DLV    2JM5    2OWI   
Structural Biology KnowledgeBase2DLV    2JM5    2OWI   
SCOP (Structural Classification of Proteins)2DLV    2JM5    2OWI   
CATH (Classification of proteins structures)2DLV    2JM5    2OWI   
SuperfamilyQ9NS28
Human Protein AtlasENSG00000150681
Peptide AtlasQ9NS28
HPRD06224
IPIIPI00016825   
Protein Interaction databases
DIP (DOE-UCLA)Q9NS28
IntAct (EBI)Q9NS28
FunCoupENSG00000150681
BioGRIDRGS18
STRING (EMBL)RGS18
ZODIACRGS18
Ontologies - Pathways
QuickGOQ9NS28
Ontology : AmiGOGTPase activator activity  cytoplasm  plasma membrane  G-protein coupled receptor signaling pathway  regulation of G-protein coupled receptor protein signaling pathway  negative regulation of signal transduction  positive regulation of GTPase activity  
Ontology : EGO-EBIGTPase activator activity  cytoplasm  plasma membrane  G-protein coupled receptor signaling pathway  regulation of G-protein coupled receptor protein signaling pathway  negative regulation of signal transduction  positive regulation of GTPase activity  
NDEx NetworkRGS18
Atlas of Cancer Signalling NetworkRGS18
Wikipedia pathwaysRGS18
Orthology - Evolution
OrthoDB64407
GeneTree (enSembl)ENSG00000150681
Phylogenetic Trees/Animal Genes : TreeFamRGS18
HOVERGENQ9NS28
HOGENOMQ9NS28
Homologs : HomoloGeneRGS18
Homology/Alignments : Family Browser (UCSC)RGS18
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRGS18 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RGS18
dbVarRGS18
ClinVarRGS18
1000_GenomesRGS18 
Exome Variant ServerRGS18
ExAC (Exome Aggregation Consortium)RGS18 (select the gene name)
Genetic variants : HAPMAP64407
Genomic Variants (DGV)RGS18 [DGVbeta]
DECIPHERRGS18 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRGS18 
Mutations
ICGC Data PortalRGS18 
TCGA Data PortalRGS18 
Broad Tumor PortalRGS18
OASIS PortalRGS18 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRGS18  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRGS18
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RGS18
DgiDB (Drug Gene Interaction Database)RGS18
DoCM (Curated mutations)RGS18 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RGS18 (select a term)
intoGenRGS18
Cancer3DRGS18(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607192   
Orphanet
MedgenRGS18
Genetic Testing Registry RGS18
NextProtQ9NS28 [Medical]
TSGene64407
GENETestsRGS18
Target ValidationRGS18
Huge Navigator RGS18 [HugePedia]
snp3D : Map Gene to Disease64407
BioCentury BCIQRGS18
ClinGenRGS18
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64407
Chemical/Pharm GKB GenePA34369
Clinical trialRGS18
Miscellaneous
canSAR (ICR)RGS18 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRGS18
EVEXRGS18
GoPubMedRGS18
iHOPRGS18
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:53:09 CEST 2017

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