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RGS21 (regulator of G protein signaling 21)

Identity

Alias_namesregulator of G-protein signalling 21
Other alias-
HGNC (Hugo) RGS21
LocusID (NCBI) 431704
Atlas_Id 72618
Location 1q31.2  [Link to chromosome band 1q31]
Location_base_pair Starts at 192316992 and ends at 192367284 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
RGS21 (1q31.2) / WDR60 (7q36.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RGS21   26839
Cards
Entrez_Gene (NCBI)RGS21  431704  regulator of G protein signaling 21
Aliases
GeneCards (Weizmann)RGS21
Ensembl hg19 (Hinxton)ENSG00000253148 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000253148 [Gene_View]  chr1:192316992-192367284 [Contig_View]  RGS21 [Vega]
ICGC DataPortalENSG00000253148
TCGA cBioPortalRGS21
AceView (NCBI)RGS21
Genatlas (Paris)RGS21
WikiGenes431704
SOURCE (Princeton)RGS21
Genetics Home Reference (NIH)RGS21
Genomic and cartography
GoldenPath hg38 (UCSC)RGS21  -     chr1:192316992-192367284 +  1q31.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RGS21  -     1q31.2   [Description]    (hg19-Feb_2009)
EnsemblRGS21 - 1q31.2 [CytoView hg19]  RGS21 - 1q31.2 [CytoView hg38]
Mapping of homologs : NCBIRGS21 [Mapview hg19]  RGS21 [Mapview hg38]
OMIM612407   
Gene and transcription
Genbank (Entrez)AY643711 BC148462 BC153059
RefSeq transcript (Entrez)NM_001039152
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RGS21
Cluster EST : UnigeneHs.558673 [ NCBI ]
CGAP (NCI)Hs.558673
Alternative Splicing GalleryENSG00000253148
Gene ExpressionRGS21 [ NCBI-GEO ]   RGS21 [ EBI - ARRAY_EXPRESS ]   RGS21 [ SEEK ]   RGS21 [ MEM ]
Gene Expression Viewer (FireBrowse)RGS21 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)431704
GTEX Portal (Tissue expression)RGS21
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2M5E4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2M5E4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2M5E4
Splice isoforms : SwissVarQ2M5E4
PhosPhoSitePlusQ2M5E4
Domaine pattern : Prosite (Expaxy)RGS (PS50132)   
Domains : Interpro (EBI)RGS    RGS_subdom1   
Domain families : Pfam (Sanger)RGS (PF00615)   
Domain families : Pfam (NCBI)pfam00615   
Domain families : Smart (EMBL)RGS (SM00315)  
Conserved Domain (NCBI)RGS21
DMDM Disease mutations431704
Blocks (Seattle)RGS21
SuperfamilyQ2M5E4
Human Protein AtlasENSG00000253148
Peptide AtlasQ2M5E4
IPIIPI00719155   
Protein Interaction databases
DIP (DOE-UCLA)Q2M5E4
IntAct (EBI)Q2M5E4
FunCoupENSG00000253148
BioGRIDRGS21
STRING (EMBL)RGS21
ZODIACRGS21
Ontologies - Pathways
QuickGOQ2M5E4
Ontology : AmiGOGTPase activator activity  cytoplasm  plasma membrane  negative regulation of signal transduction  positive regulation of GTPase activity  
Ontology : EGO-EBIGTPase activator activity  cytoplasm  plasma membrane  negative regulation of signal transduction  positive regulation of GTPase activity  
NDEx NetworkRGS21
Atlas of Cancer Signalling NetworkRGS21
Wikipedia pathwaysRGS21
Orthology - Evolution
OrthoDB431704
GeneTree (enSembl)ENSG00000253148
Phylogenetic Trees/Animal Genes : TreeFamRGS21
HOVERGENQ2M5E4
HOGENOMQ2M5E4
Homologs : HomoloGeneRGS21
Homology/Alignments : Family Browser (UCSC)RGS21
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRGS21 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RGS21
dbVarRGS21
ClinVarRGS21
1000_GenomesRGS21 
Exome Variant ServerRGS21
ExAC (Exome Aggregation Consortium)RGS21 (select the gene name)
Genetic variants : HAPMAP431704
Genomic Variants (DGV)RGS21 [DGVbeta]
DECIPHERRGS21 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRGS21 
Mutations
ICGC Data PortalRGS21 
TCGA Data PortalRGS21 
Broad Tumor PortalRGS21
OASIS PortalRGS21 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRGS21  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRGS21
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RGS21
DgiDB (Drug Gene Interaction Database)RGS21
DoCM (Curated mutations)RGS21 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RGS21 (select a term)
intoGenRGS21
Cancer3DRGS21(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612407   
Orphanet
MedgenRGS21
Genetic Testing Registry RGS21
NextProtQ2M5E4 [Medical]
TSGene431704
GENETestsRGS21
Target ValidationRGS21
Huge Navigator RGS21 [HugePedia]
snp3D : Map Gene to Disease431704
BioCentury BCIQRGS21
ClinGenRGS21
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD431704
Chemical/Pharm GKB GenePA134875582
Clinical trialRGS21
Miscellaneous
canSAR (ICR)RGS21 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRGS21
EVEXRGS21
GoPubMedRGS21
iHOPRGS21
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:36:09 CEST 2017

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