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RGS9BP (regulator of G protein signaling 9 binding protein)

Identity

Alias_namesregulator of G protein signalling 9 binding protein
Alias_symbol (synonym)FLJ45744
PERRS
R9AP
RGS9
Other alias
HGNC (Hugo) RGS9BP
LocusID (NCBI) 388531
Atlas_Id 72621
Location 19q13.11  [Link to chromosome band 19q13]
Location_base_pair Starts at 32675407 and ends at 32678300 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RGS9BP   30304
Cards
Entrez_Gene (NCBI)RGS9BP  388531  regulator of G protein signaling 9 binding protein
AliasesPERRS; R9AP; RGS9
GeneCards (Weizmann)RGS9BP
Ensembl hg19 (Hinxton)ENSG00000186326 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186326 [Gene_View]  chr19:32675407-32678300 [Contig_View]  RGS9BP [Vega]
ICGC DataPortalENSG00000186326
TCGA cBioPortalRGS9BP
AceView (NCBI)RGS9BP
Genatlas (Paris)RGS9BP
WikiGenes388531
SOURCE (Princeton)RGS9BP
Genetics Home Reference (NIH)RGS9BP
Genomic and cartography
GoldenPath hg38 (UCSC)RGS9BP  -     chr19:32675407-32678300 +  19q13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RGS9BP  -     19q13.11   [Description]    (hg19-Feb_2009)
EnsemblRGS9BP - 19q13.11 [CytoView hg19]  RGS9BP - 19q13.11 [CytoView hg38]
Mapping of homologs : NCBIRGS9BP [Mapview hg19]  RGS9BP [Mapview hg38]
OMIM607814   608415   
Gene and transcription
Genbank (Entrez)AF086461 AK124499 AK127646 BC172343
RefSeq transcript (Entrez)NM_207391
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RGS9BP
Cluster EST : UnigeneHs.528491 [ NCBI ]
CGAP (NCI)Hs.528491
Alternative Splicing GalleryENSG00000186326
Gene ExpressionRGS9BP [ NCBI-GEO ]   RGS9BP [ EBI - ARRAY_EXPRESS ]   RGS9BP [ SEEK ]   RGS9BP [ MEM ]
Gene Expression Viewer (FireBrowse)RGS9BP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)388531
GTEX Portal (Tissue expression)RGS9BP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZS82   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZS82  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZS82
Splice isoforms : SwissVarQ6ZS82
PhosPhoSitePlusQ6ZS82
Domains : Interpro (EBI)RGS7BP/RGS9BP    RGS9BP   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RGS9BP
DMDM Disease mutations388531
Blocks (Seattle)RGS9BP
SuperfamilyQ6ZS82
Human Protein AtlasENSG00000186326
Peptide AtlasQ6ZS82
HPRD16991
IPIIPI00382638   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZS82
IntAct (EBI)Q6ZS82
FunCoupENSG00000186326
BioGRIDRGS9BP
STRING (EMBL)RGS9BP
ZODIACRGS9BP
Ontologies - Pathways
QuickGOQ6ZS82
Ontology : AmiGOphotoreceptor outer segment  negative regulation of signal transduction  integral component of membrane  detection of light stimulus involved in visual perception  
Ontology : EGO-EBIphotoreceptor outer segment  negative regulation of signal transduction  integral component of membrane  detection of light stimulus involved in visual perception  
NDEx NetworkRGS9BP
Atlas of Cancer Signalling NetworkRGS9BP
Wikipedia pathwaysRGS9BP
Orthology - Evolution
OrthoDB388531
GeneTree (enSembl)ENSG00000186326
Phylogenetic Trees/Animal Genes : TreeFamRGS9BP
HOVERGENQ6ZS82
HOGENOMQ6ZS82
Homologs : HomoloGeneRGS9BP
Homology/Alignments : Family Browser (UCSC)RGS9BP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRGS9BP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RGS9BP
dbVarRGS9BP
ClinVarRGS9BP
1000_GenomesRGS9BP 
Exome Variant ServerRGS9BP
ExAC (Exome Aggregation Consortium)RGS9BP (select the gene name)
Genetic variants : HAPMAP388531
Genomic Variants (DGV)RGS9BP [DGVbeta]
DECIPHERRGS9BP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRGS9BP 
Mutations
ICGC Data PortalRGS9BP 
TCGA Data PortalRGS9BP 
Broad Tumor PortalRGS9BP
OASIS PortalRGS9BP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRGS9BP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRGS9BP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)Eye diseases - LOVD
BioMutasearch RGS9BP
DgiDB (Drug Gene Interaction Database)RGS9BP
DoCM (Curated mutations)RGS9BP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RGS9BP (select a term)
intoGenRGS9BP
Cancer3DRGS9BP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607814    608415   
Orphanet11074   
MedgenRGS9BP
Genetic Testing Registry RGS9BP
NextProtQ6ZS82 [Medical]
TSGene388531
GENETestsRGS9BP
Target ValidationRGS9BP
Huge Navigator RGS9BP [HugePedia]
snp3D : Map Gene to Disease388531
BioCentury BCIQRGS9BP
ClinGenRGS9BP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388531
Chemical/Pharm GKB GenePA162401280
Clinical trialRGS9BP
Miscellaneous
canSAR (ICR)RGS9BP (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRGS9BP
EVEXRGS9BP
GoPubMedRGS9BP
iHOPRGS9BP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:36:09 CEST 2017

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