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RHCE (Rh blood group CcEe antigens)

Identity

Alias_namesRH
Rhesus blood group
Alias_symbol (synonym)CD240CE
Other aliasRH30A
RHC
RHCe(152N)
RHE
RHIXB
RHPI
Rh4
RhIVb(J)
RhVI
RhVIII
HGNC (Hugo) RHCE
LocusID (NCBI) 6006
Atlas_Id 56117
Location 1p36.11  [Link to chromosome band 1p36]
Location_base_pair Starts at 25362249 and ends at 25420872 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
KPNA6 (1p35.1) / RHCE (1p36.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RHCE   10008
LRG (Locus Reference Genomic)LRG_797
Cards
Entrez_Gene (NCBI)RHCE  6006  Rh blood group CcEe antigens
AliasesCD240CE; RH; RH30A; RHC; 
RHCe(152N); RHE; RHIXB; RHPI; Rh4; RhIVb(J); RhVI; RhVIII
GeneCards (Weizmann)RHCE
Ensembl hg19 (Hinxton)ENSG00000188672 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188672 [Gene_View]  chr1:25362249-25420872 [Contig_View]  RHCE [Vega]
ICGC DataPortalENSG00000188672
TCGA cBioPortalRHCE
AceView (NCBI)RHCE
Genatlas (Paris)RHCE
WikiGenes6006
SOURCE (Princeton)RHCE
Genetics Home Reference (NIH)RHCE
Genomic and cartography
GoldenPath hg38 (UCSC)RHCE  -     chr1:25362249-25420872 -  1p36.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RHCE  -     1p36.11   [Description]    (hg19-Feb_2009)
EnsemblRHCE - 1p36.11 [CytoView hg19]  RHCE - 1p36.11 [CytoView hg38]
Mapping of homologs : NCBIRHCE [Mapview hg19]  RHCE [Mapview hg38]
OMIM111690   111700   
Gene and transcription
Genbank (Entrez)###############################################################################################################################################################################################################################################################
RefSeq transcript (Entrez)NM_001330430 NM_020485 NM_138616 NM_138617 NM_138618
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RHCE
Cluster EST : UnigeneHs.523054 [ NCBI ]
CGAP (NCI)Hs.523054
Alternative Splicing GalleryENSG00000188672
Gene ExpressionRHCE [ NCBI-GEO ]   RHCE [ EBI - ARRAY_EXPRESS ]   RHCE [ SEEK ]   RHCE [ MEM ]
Gene Expression Viewer (FireBrowse)RHCE [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6006
GTEX Portal (Tissue expression)RHCE
Protein : pattern, domain, 3D structure
UniProt/SwissProtP18577   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP18577  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP18577
Splice isoforms : SwissVarP18577
PhosPhoSitePlusP18577
Domains : Interpro (EBI)Ammonium/urea_transptr    NH4_transpt_AmtB-like_dom    RhesusRHD   
Domain families : Pfam (Sanger)Ammonium_transp (PF00909)   
Domain families : Pfam (NCBI)pfam00909   
Conserved Domain (NCBI)RHCE
DMDM Disease mutations6006
Blocks (Seattle)RHCE
SuperfamilyP18577
Human Protein AtlasENSG00000188672
Peptide AtlasP18577
HPRD00200
IPI###############################################################################################################################################################################################################################################################   
Protein Interaction databases
DIP (DOE-UCLA)P18577
IntAct (EBI)P18577
FunCoupENSG00000188672
BioGRIDRHCE
STRING (EMBL)RHCE
ZODIACRHCE
Ontologies - Pathways
QuickGOP18577
Ontology : AmiGOintegral component of plasma membrane  ammonium transmembrane transporter activity  organic cation transport  ammonium transmembrane transport  
Ontology : EGO-EBIintegral component of plasma membrane  ammonium transmembrane transporter activity  organic cation transport  ammonium transmembrane transport  
NDEx NetworkRHCE
Atlas of Cancer Signalling NetworkRHCE
Wikipedia pathwaysRHCE
Orthology - Evolution
OrthoDB6006
GeneTree (enSembl)ENSG00000188672
Phylogenetic Trees/Animal Genes : TreeFamRHCE
HOVERGENP18577
HOGENOMP18577
Homologs : HomoloGeneRHCE
Homology/Alignments : Family Browser (UCSC)RHCE
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRHCE [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RHCE
dbVarRHCE
ClinVarRHCE
1000_GenomesRHCE 
Exome Variant ServerRHCE
ExAC (Exome Aggregation Consortium)RHCE (select the gene name)
Genetic variants : HAPMAP6006
Genomic Variants (DGV)RHCE [DGVbeta]
DECIPHERRHCE [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRHCE 
Mutations
ICGC Data PortalRHCE 
TCGA Data PortalRHCE 
Broad Tumor PortalRHCE
OASIS PortalRHCE [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRHCE  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRHCE
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RHCE
DgiDB (Drug Gene Interaction Database)RHCE
DoCM (Curated mutations)RHCE (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RHCE (select a term)
intoGenRHCE
Cancer3DRHCE(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM111690    111700   
Orphanet10997   
MedgenRHCE
Genetic Testing Registry RHCE
NextProtP18577 [Medical]
TSGene6006
GENETestsRHCE
Huge Navigator RHCE [HugePedia]
snp3D : Map Gene to Disease6006
BioCentury BCIQRHCE
ClinGenRHCE
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6006
Chemical/Pharm GKB GenePA34386
Clinical trialRHCE
Miscellaneous
canSAR (ICR)RHCE (select the gene name)
Probes
Litterature
PubMed85 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRHCE
EVEXRHCE
GoPubMedRHCE
iHOPRHCE
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:34:56 CEST 2017

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