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RHD (Rh blood group D antigen)

Identity

Alias_namesRH
Rhesus blood group
Alias_symbol (synonym)Rh30a
Rh4
RhPI
RhII
DIIIc
CD240D
Other aliasRH30
RHCED
RHDVA(TT)
RHDel
RHPII
RHXIII
RhDCw
RhK562-II
HGNC (Hugo) RHD
LocusID (NCBI) 6007
Atlas_Id 55766
Location 1p36.11  [Link to chromosome band 1p36]
Location_base_pair Starts at 25272486 and ends at 25330445 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RHD   10009
LRG (Locus Reference Genomic)LRG_796
Cards
Entrez_Gene (NCBI)RHD  6007  Rh blood group D antigen
AliasesCD240D; DIIIc; RH; RH30; 
RHCED; RHDVA(TT); RHDel; RHPII; RHXIII; Rh4; RhDCw; RhII; RhK562-II; RhPI
GeneCards (Weizmann)RHD
Ensembl hg19 (Hinxton)ENSG00000187010 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187010 [Gene_View]  chr1:25272486-25330445 [Contig_View]  RHD [Vega]
ICGC DataPortalENSG00000187010
TCGA cBioPortalRHD
AceView (NCBI)RHD
Genatlas (Paris)RHD
WikiGenes6007
SOURCE (Princeton)RHD
Genetics Home Reference (NIH)RHD
Genomic and cartography
GoldenPath hg38 (UCSC)RHD  -     chr1:25272486-25330445 +  1p36.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RHD  -     1p36.11   [Description]    (hg19-Feb_2009)
EnsemblRHD - 1p36.11 [CytoView hg19]  RHD - 1p36.11 [CytoView hg38]
Mapping of homologs : NCBIRHD [Mapview hg19]  RHD [Mapview hg38]
OMIM111680   
Gene and transcription
Genbank (Entrez)###############################################################################################################################################################################################################################################################
RefSeq transcript (Entrez)NM_001127691 NM_001282867 NM_001282868 NM_001282869 NM_001282870 NM_001282871 NM_001282872 NM_016124 NM_016225
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RHD
Cluster EST : UnigeneHs.449968 [ NCBI ]
CGAP (NCI)Hs.449968
Alternative Splicing GalleryENSG00000187010
Gene ExpressionRHD [ NCBI-GEO ]   RHD [ EBI - ARRAY_EXPRESS ]   RHD [ SEEK ]   RHD [ MEM ]
Gene Expression Viewer (FireBrowse)RHD [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6007
GTEX Portal (Tissue expression)RHD
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ02161   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ02161  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ02161
Splice isoforms : SwissVarQ02161
PhosPhoSitePlusQ02161
Domains : Interpro (EBI)Ammonium/urea_transptr    NH4_transpt_AmtB-like_dom    RhesusRHD   
Domain families : Pfam (Sanger)Ammonium_transp (PF00909)   
Domain families : Pfam (NCBI)pfam00909   
Conserved Domain (NCBI)RHD
DMDM Disease mutations6007
Blocks (Seattle)RHD
SuperfamilyQ02161
Human Protein AtlasENSG00000187010
Peptide AtlasQ02161
HPRD00199
IPIIPI00869023   IPI00941406   IPI00930370   IPI00930705   IPI00895931   IPI00908585   IPI00930455   IPI00930395   IPI00910229   IPI00973866   IPI00930474   IPI00478119   IPI00930081   IPI00930420   IPI00477211   IPI01018669   IPI00478571   IPI00938085   IPI00816270   
Protein Interaction databases
DIP (DOE-UCLA)Q02161
IntAct (EBI)Q02161
FunCoupENSG00000187010
BioGRIDRHD
STRING (EMBL)RHD
ZODIACRHD
Ontologies - Pathways
QuickGOQ02161
Ontology : AmiGOintegral component of plasma membrane  ammonium transmembrane transporter activity  organic cation transport  ammonium transmembrane transport  
Ontology : EGO-EBIintegral component of plasma membrane  ammonium transmembrane transporter activity  organic cation transport  ammonium transmembrane transport  
NDEx NetworkRHD
Atlas of Cancer Signalling NetworkRHD
Wikipedia pathwaysRHD
Orthology - Evolution
OrthoDB6007
GeneTree (enSembl)ENSG00000187010
Phylogenetic Trees/Animal Genes : TreeFamRHD
HOVERGENQ02161
HOGENOMQ02161
Homologs : HomoloGeneRHD
Homology/Alignments : Family Browser (UCSC)RHD
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRHD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RHD
dbVarRHD
ClinVarRHD
1000_GenomesRHD 
Exome Variant ServerRHD
ExAC (Exome Aggregation Consortium)RHD (select the gene name)
Genetic variants : HAPMAP6007
Genomic Variants (DGV)RHD [DGVbeta]
DECIPHERRHD [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRHD 
Mutations
ICGC Data PortalRHD 
TCGA Data PortalRHD 
Broad Tumor PortalRHD
OASIS PortalRHD [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRHD  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRHD
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RHD
DgiDB (Drug Gene Interaction Database)RHD
DoCM (Curated mutations)RHD (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RHD (select a term)
intoGenRHD
Cancer3DRHD(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM111680   
Orphanet10997   
MedgenRHD
Genetic Testing Registry RHD
NextProtQ02161 [Medical]
TSGene6007
GENETestsRHD
Huge Navigator RHD [HugePedia]
snp3D : Map Gene to Disease6007
BioCentury BCIQRHD
ClinGenRHD
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6007
Chemical/Pharm GKB GenePA34387
Clinical trialRHD
Miscellaneous
canSAR (ICR)RHD (select the gene name)
Probes
Litterature
PubMed149 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRHD
EVEXRHD
GoPubMedRHD
iHOPRHD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Fri May 19 12:34:56 CEST 2017

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