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RHOT1P3 (ras homolog family member T1 pseudogene 3)

Identity

Alias_namesras homolog gene family, member T1 pseudogene 3
Other alias-
HGNC (Hugo) RHOT1P3
LocusID (NCBI) 100462810
Atlas_Id 77583
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 32142694 and ends at 32142721 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)RHOT1P3   37839
Cards
Entrez_Gene (NCBI)RHOT1P3  100462810  ras homolog family member T1 pseudogene 3
Aliases
GeneCards (Weizmann)RHOT1P3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:32142694-32142721 [Contig_View]  RHOT1P3 [Vega]
TCGA cBioPortalRHOT1P3
AceView (NCBI)RHOT1P3
Genatlas (Paris)RHOT1P3
WikiGenes100462810
SOURCE (Princeton)RHOT1P3
Genetics Home Reference (NIH)RHOT1P3
Genomic and cartography
GoldenPath hg38 (UCSC)RHOT1P3  -     chr17:32142694-32142721 +  17q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RHOT1P3  -     17q11.2   [Description]    (hg19-Feb_2009)
EnsemblRHOT1P3 - 17q11.2 [CytoView hg19]  RHOT1P3 - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBIRHOT1P3 [Mapview hg19]  RHOT1P3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DQ578921
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000013 NC_018924 NG_021958 NT_187594
Consensus coding sequences : CCDS (NCBI)RHOT1P3
Gene ExpressionRHOT1P3 [ NCBI-GEO ]   RHOT1P3 [ EBI - ARRAY_EXPRESS ]   RHOT1P3 [ SEEK ]   RHOT1P3 [ MEM ]
Gene Expression Viewer (FireBrowse)RHOT1P3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100462810
GTEX Portal (Tissue expression)RHOT1P3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RHOT1P3
DMDM Disease mutations100462810
Blocks (Seattle)RHOT1P3
Protein Interaction databases
BioGRIDRHOT1P3
STRING (EMBL)RHOT1P3
ZODIACRHOT1P3
Ontologies - Pathways
Huge Navigator RHOT1P3 [HugePedia]
snp3D : Map Gene to Disease100462810
BioCentury BCIQRHOT1P3
ClinGenRHOT1P3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100462810
Clinical trialRHOT1P3
Miscellaneous
canSAR (ICR)RHOT1P3 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRHOT1P3
EVEXRHOT1P3
GoPubMedRHOT1P3
iHOPRHOT1P3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:24:51 CET 2017

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