Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

RHOV (ras homolog family member V)

Identity

Alias_namesARHV
ras homolog gene family
Alias_symbol (synonym)Chp
WRCH2
Other aliasCHP
HGNC (Hugo) RHOV
LocusID (NCBI) 171177
Atlas_Id 53970
Location 15q15.1  [Link to chromosome band 15q15]
Location_base_pair Starts at 40872214 and ends at 40874289 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RHOV   18313
Cards
Entrez_Gene (NCBI)RHOV  171177  ras homolog family member V
AliasesARHV; CHP; WRCH2
GeneCards (Weizmann)RHOV
Ensembl hg19 (Hinxton)ENSG00000104140 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000104140 [Gene_View]  chr15:40872214-40874289 [Contig_View]  RHOV [Vega]
ICGC DataPortalENSG00000104140
TCGA cBioPortalRHOV
AceView (NCBI)RHOV
Genatlas (Paris)RHOV
WikiGenes171177
SOURCE (Princeton)RHOV
Genetics Home Reference (NIH)RHOV
Genomic and cartography
GoldenPath hg38 (UCSC)RHOV  -     chr15:40872214-40874289 -  15q15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RHOV  -     15q15.1   [Description]    (hg19-Feb_2009)
EnsemblRHOV - 15q15.1 [CytoView hg19]  RHOV - 15q15.1 [CytoView hg38]
Mapping of homologs : NCBIRHOV [Mapview hg19]  RHOV [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB079131 AY059636 BC019353 BC105020 BC105022
RefSeq transcript (Entrez)NM_133639
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RHOV
Cluster EST : UnigeneHs.447901 [ NCBI ]
CGAP (NCI)Hs.447901
Alternative Splicing GalleryENSG00000104140
Gene ExpressionRHOV [ NCBI-GEO ]   RHOV [ EBI - ARRAY_EXPRESS ]   RHOV [ SEEK ]   RHOV [ MEM ]
Gene Expression Viewer (FireBrowse)RHOV [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)171177
GTEX Portal (Tissue expression)RHOV
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96L33   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96L33  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96L33
Splice isoforms : SwissVarQ96L33
PhosPhoSitePlusQ96L33
Domaine pattern : Prosite (Expaxy)RHO (PS51420)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTP-bd_dom    Small_GTPase   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Conserved Domain (NCBI)RHOV
DMDM Disease mutations171177
Blocks (Seattle)RHOV
SuperfamilyQ96L33
Human Protein AtlasENSG00000104140
Peptide AtlasQ96L33
HPRD10191
IPIIPI00154827   IPI00844512   
Protein Interaction databases
DIP (DOE-UCLA)Q96L33
IntAct (EBI)Q96L33
FunCoupENSG00000104140
BioGRIDRHOV
STRING (EMBL)RHOV
ZODIACRHOV
Ontologies - Pathways
QuickGOQ96L33
Ontology : AmiGOGTPase activity  protein binding  GTP binding  cytosol  plasma membrane  small GTPase mediated signal transduction  endosome membrane  metal ion binding  regulation of small GTPase mediated signal transduction  
Ontology : EGO-EBIGTPase activity  protein binding  GTP binding  cytosol  plasma membrane  small GTPase mediated signal transduction  endosome membrane  metal ion binding  regulation of small GTPase mediated signal transduction  
NDEx NetworkRHOV
Atlas of Cancer Signalling NetworkRHOV
Wikipedia pathwaysRHOV
Orthology - Evolution
OrthoDB171177
GeneTree (enSembl)ENSG00000104140
Phylogenetic Trees/Animal Genes : TreeFamRHOV
HOVERGENQ96L33
HOGENOMQ96L33
Homologs : HomoloGeneRHOV
Homology/Alignments : Family Browser (UCSC)RHOV
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRHOV [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RHOV
dbVarRHOV
ClinVarRHOV
1000_GenomesRHOV 
Exome Variant ServerRHOV
ExAC (Exome Aggregation Consortium)RHOV (select the gene name)
Genetic variants : HAPMAP171177
Genomic Variants (DGV)RHOV [DGVbeta]
DECIPHERRHOV [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRHOV 
Mutations
ICGC Data PortalRHOV 
TCGA Data PortalRHOV 
Broad Tumor PortalRHOV
OASIS PortalRHOV [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRHOV  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRHOV
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RHOV
DgiDB (Drug Gene Interaction Database)RHOV
DoCM (Curated mutations)RHOV (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RHOV (select a term)
intoGenRHOV
Cancer3DRHOV(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenRHOV
Genetic Testing Registry RHOV
NextProtQ96L33 [Medical]
TSGene171177
GENETestsRHOV
Target ValidationRHOV
Huge Navigator RHOV [HugePedia]
snp3D : Map Gene to Disease171177
BioCentury BCIQRHOV
ClinGenRHOV
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD171177
Chemical/Pharm GKB GenePA38313
Clinical trialRHOV
Miscellaneous
canSAR (ICR)RHOV (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRHOV
EVEXRHOV
GoPubMedRHOV
iHOPRHOV
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:53:16 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.