| Nomenclature | | HGNC (Hugo) | RLF 10025 |
| Entrez_Gene (NCBI) | RLF 6018 rearranged L-myc fusion |
| Cards | | GeneCards (Weizmann) | RLF |
| Ensembl (Hinxton) | ENSG00000117000 [Gene_View] chr1:40627041-40706593 [Contig_View] RLF [Vega] |
| AceView (NCBI) | RLF |
| Genatlas (Paris) | RLF |
| SOURCE (Stanford) | NM_012421 |
| Genomic and cartography | | GoldenPath (UCSC) | RLF - 1p34.2 chr1:40627041-40706593 + 1p34.2 [Description] (hg19-Feb_2009) |
| Ensembl | RLF - 1p34.2 [CytoView] |
| Mapping of homologs : NCBI | RLF [Mapview] |
| OMIM | 180610 |
| Gene and transcription |
| Genbank (Entrez) | AB209099 AK307662 BC113666 BM542854 HQ258544 |
| RefSeq transcript (SRS) | NM_012421 |
| RefSeq transcript (Entrez) | NM_012421 |
| RefSeq genomic (SRS) | AC_000133 NC_000001 NC_018912 NT_032977 NW_001838577 NW_004077990 |
| RefSeq genomic (Entrez) | AC_000133 NC_000001 NC_018912 NT_032977 NW_001838577 NW_004077990 |
| Consensus coding sequences : CCDS (NCBI) | RLF |
| Cluster EST : Unigene | Hs.205627 [ SRS ] Hs.205627 [ NCBI ] |
| CGAP (NCI) | Hs.205627 |
| Alternative Splicing : Fast-db (Paris) | GSHG0000411 |
| Alternative Splicing Gallery | ENSG00000117000 |
| Gene Expression | RLF [ NCBI-GEO ] RLF [ EBI - ARRAY_EXPRESS ] |
| Protein : pattern, domain, 3D structure |
|---|
| UniProt/SwissProt | Q13129 (SRS) Q13129 (Uniprot) |
| NextProt | Q13129 |
| With graphics : InterPro | Q13129 |
| Splice isoforms : SwissVar | Q13129(Swissvar) |
| Domaine pattern : Prosite (SRS) | ZINC_FINGER_C2H2_1 (PS00028) ZINC_FINGER_C2H2_2 (PS50157) |
| Domaine pattern : Prosite (Expaxy) | ZINC_FINGER_C2H2_1 (PS00028) ZINC_FINGER_C2H2_2 (PS50157) |
| Domains : Interpro (SRS) | Znf_C2H2 Znf_C2H2-like Znf_C2H2/integrase_DNA-bd |
| Domains : Interpro (EBI) | Znf_C2H2 Znf_C2H2-like Znf_C2H2/integrase_DNA-bd |
| Related proteins : CluSTr | Q13129 |
| Domain families : Pfam (SRS) | |
| Domain families : Pfam (Sanger) | |
| Domain families : Pfam (NCBI) | |
| Domain families : Smart (EMBL) | ZnF_C2H2 (SM00355) |
| DMDM | 6018 |
| Blocks (Seattle) | Q13129 |
| Human Protein Atlas | ENSG00000117000 |
| HPRD | 01614 |
| IPI | IPI00018294 IPI01010914 |
| Protein Interaction databases |
|---|
| DIP (DOE-UCLA) | Q13129 |
| IntAct (EBI) | Q13129 |
| FunCoup | ENSG00000117000 |
| REACTOME | RLF |
| Protein Interaction Database | 6018 |
| BioGRID | RLF |
| InParanoid | Q13129 |
| Interologous Interaction database | Q13129 |
| IntegromeDB | RLF |
| Polymorphism : SNP, mutations, diseases | | SNP Single Nucleotide Polymorphism (NCBI) | RLF |
| SNP (GeneSNP Utah) | RLF |
| SNP : HGBase | RLF |
| Genetic variants : HAPMAP | RLF |
| Somatic Mutations in Cancer : COSMIC | RLF |
| CONAN: Copy Number Analysis | RLF |
| Mutations and Diseases : HGMD | RLF |
| OMIM | 180610 |
| GENETests | 180610 |
| Disease Genetic Association | RLF |
| Huge Navigator |
RLF [HugePedia] RLF [HugeCancerGEM] |
| Genomic Variants | RLF RLF [DGVbeta] |
| snp3D : Map Gene to Disease | 6018 |
| General knowledge |
|---|
| Homologs : HomoloGene | RLF |
| Homology/Alignments : Family Browser (UCSC) | RLF |
| Phylogenetic Trees/Animal Genes : TreeFam | RLF |
| Chemical/Protein Interactions : CTD | 6018 |
| Chemical/Pharm GKB Gene | PA34398 |
| Clinical trial | RLF |
| Cancer Resource (Charite) | ENSG00000117000 |
| Ontology : AmiGO | DNA binding protein binding nucleus transcription, DNA-dependent regulation of transcription, DNA-dependent zinc ion binding DNA mediated transformation DNA integration positive regulation of transcription, DNA-dependent positive regulation of transcription from RNA polymerase II promoter metal ion binding chromosome organization chromosome organization |
| Ontology : EGO-EBI | DNA binding protein binding nucleus transcription, DNA-dependent regulation of transcription, DNA-dependent zinc ion binding DNA mediated transformation DNA integration positive regulation of transcription, DNA-dependent positive regulation of transcription from RNA polymerase II promoter metal ion binding chromosome organization chromosome organization |
| Other databases |
| Probes |
|---|
| Litterature | | PubMed | 14 Pubmed reference(s) in Entrez |
| PubGene | RLF |
| iHOP | RLF |
