Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

RLN3 (relaxin 3)

Identity

Alias_namesrelaxin 3 (H3)
Alias_symbol (synonym)ZINS4
RXN3
H3
Other aliasinsl7
HGNC (Hugo) RLN3
LocusID (NCBI) 117579
Atlas_Id 72655
Location 19p13.12  [Link to chromosome band 19p13]
Location_base_pair Starts at 14028148 and ends at 14031558 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
IL27RA (19p13.12) / RLN3 (19p13.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RLN3   17135
Cards
Entrez_Gene (NCBI)RLN3  117579  relaxin 3
AliasesH3; RXN3; ZINS4; insl7
GeneCards (Weizmann)RLN3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:14028148-14031558 [Contig_View]  RLN3 [Vega]
TCGA cBioPortalRLN3
AceView (NCBI)RLN3
Genatlas (Paris)RLN3
WikiGenes117579
SOURCE (Princeton)RLN3
Genetics Home Reference (NIH)RLN3
Genomic and cartography
GoldenPath hg38 (UCSC)RLN3  -     chr19:14028148-14031558 +  19p13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RLN3  -     19p13.12   [Description]    (hg19-Feb_2009)
EnsemblRLN3 - 19p13.12 [CytoView hg19]  RLN3 - 19p13.12 [CytoView hg38]
Mapping of homologs : NCBIRLN3 [Mapview hg19]  RLN3 [Mapview hg38]
OMIM606855   
Gene and transcription
Genbank (Entrez)AB076563 AF447451 AY358181 BC110069 BC140935
RefSeq transcript (Entrez)NM_001311197 NM_080864
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RLN3
Cluster EST : UnigeneHs.352155 [ NCBI ]
CGAP (NCI)Hs.352155
Gene ExpressionRLN3 [ NCBI-GEO ]   RLN3 [ EBI - ARRAY_EXPRESS ]   RLN3 [ SEEK ]   RLN3 [ MEM ]
Gene Expression Viewer (FireBrowse)RLN3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)117579
GTEX Portal (Tissue expression)RLN3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WXF3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WXF3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WXF3
Splice isoforms : SwissVarQ8WXF3
PhosPhoSitePlusQ8WXF3
Domaine pattern : Prosite (Expaxy)INSULIN (PS00262)   
Domains : Interpro (EBI)Insulin-like    Insulin_CS    Insulin_family   
Domain families : Pfam (Sanger)Insulin (PF00049)   
Domain families : Pfam (NCBI)pfam00049   
Domain families : Smart (EMBL)IlGF (SM00078)  
Conserved Domain (NCBI)RLN3
DMDM Disease mutations117579
Blocks (Seattle)RLN3
PDB (SRS)2FHW    2K1V   
PDB (PDBSum)2FHW    2K1V   
PDB (IMB)2FHW    2K1V   
PDB (RSDB)2FHW    2K1V   
Structural Biology KnowledgeBase2FHW    2K1V   
SCOP (Structural Classification of Proteins)2FHW    2K1V   
CATH (Classification of proteins structures)2FHW    2K1V   
SuperfamilyQ8WXF3
Peptide AtlasQ8WXF3
HPRD06031
IPIIPI00103527   
Protein Interaction databases
DIP (DOE-UCLA)Q8WXF3
IntAct (EBI)Q8WXF3
BioGRIDRLN3
STRING (EMBL)RLN3
ZODIACRLN3
Ontologies - Pathways
QuickGOQ8WXF3
Ontology : AmiGOG-protein coupled receptor binding  hormone activity  protein binding  extracellular region  extracellular region  
Ontology : EGO-EBIG-protein coupled receptor binding  hormone activity  protein binding  extracellular region  extracellular region  
NDEx NetworkRLN3
Atlas of Cancer Signalling NetworkRLN3
Wikipedia pathwaysRLN3
Orthology - Evolution
OrthoDB117579
Phylogenetic Trees/Animal Genes : TreeFamRLN3
HOVERGENQ8WXF3
HOGENOMQ8WXF3
Homologs : HomoloGeneRLN3
Homology/Alignments : Family Browser (UCSC)RLN3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRLN3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RLN3
dbVarRLN3
ClinVarRLN3
1000_GenomesRLN3 
Exome Variant ServerRLN3
ExAC (Exome Aggregation Consortium)RLN3 (select the gene name)
Genetic variants : HAPMAP117579
Genomic Variants (DGV)RLN3 [DGVbeta]
DECIPHERRLN3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRLN3 
Mutations
ICGC Data PortalRLN3 
TCGA Data PortalRLN3 
Broad Tumor PortalRLN3
OASIS PortalRLN3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRLN3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRLN3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RLN3
DgiDB (Drug Gene Interaction Database)RLN3
DoCM (Curated mutations)RLN3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RLN3 (select a term)
intoGenRLN3
Cancer3DRLN3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606855   
Orphanet
MedgenRLN3
Genetic Testing Registry RLN3
NextProtQ8WXF3 [Medical]
TSGene117579
GENETestsRLN3
Target ValidationRLN3
Huge Navigator RLN3 [HugePedia]
snp3D : Map Gene to Disease117579
BioCentury BCIQRLN3
ClinGenRLN3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD117579
Chemical/Pharm GKB GenePA34401
Clinical trialRLN3
Miscellaneous
canSAR (ICR)RLN3 (select the gene name)
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRLN3
EVEXRLN3
GoPubMedRLN3
iHOPRLN3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:38:44 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.