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RMND1 (required for meiotic nuclear division 1 homolog)

Identity

Alias_namesC6orf96
chromosome 6 open reading frame 96
required for meiotic nuclear division 1 homolog (S. cerevisiae)
Alias_symbol (synonym)bA351K16.3
FLJ20627
RMD1
Other aliasCOXPD11
bA351K16
HGNC (Hugo) RMND1
LocusID (NCBI) 55005
Atlas_Id 55903
Location 6q25.1  [Link to chromosome band 6q25]
Location_base_pair Starts at 151404762 and ends at 151452181 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
RMND1 (6q25.1) / ZDHHC14 (6q25.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  RMND1/ZDHHC14 (6q25)


External links

Nomenclature
HGNC (Hugo)RMND1   21176
Cards
Entrez_Gene (NCBI)RMND1  55005  required for meiotic nuclear division 1 homolog
AliasesC6orf96; COXPD11; RMD1; bA351K16; 
bA351K16.3
GeneCards (Weizmann)RMND1
Ensembl hg19 (Hinxton)ENSG00000155906 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000155906 [Gene_View]  ENSG00000155906 [Sequence]  chr6:151404762-151452181 [Contig_View]  RMND1 [Vega]
ICGC DataPortalENSG00000155906
TCGA cBioPortalRMND1
AceView (NCBI)RMND1
Genatlas (Paris)RMND1
WikiGenes55005
SOURCE (Princeton)RMND1
Genetics Home Reference (NIH)RMND1
Genomic and cartography
GoldenPath hg38 (UCSC)RMND1  -     chr6:151404762-151452181 -  6q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RMND1  -     6q25.1   [Description]    (hg19-Feb_2009)
EnsemblRMND1 - 6q25.1 [CytoView hg19]  RMND1 - 6q25.1 [CytoView hg38]
Mapping of homologs : NCBIRMND1 [Mapview hg19]  RMND1 [Mapview hg38]
OMIM614917   614922   
Gene and transcription
Genbank (Entrez)AK000634 AK026480 AK292339 BC012081 BC070271
RefSeq transcript (Entrez)NM_001271937 NM_017909
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RMND1
Cluster EST : UnigeneHs.744622 [ NCBI ]
CGAP (NCI)Hs.744622
Alternative Splicing GalleryENSG00000155906
Gene ExpressionRMND1 [ NCBI-GEO ]   RMND1 [ EBI - ARRAY_EXPRESS ]   RMND1 [ SEEK ]   RMND1 [ MEM ]
Gene Expression Viewer (FireBrowse)RMND1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55005
GTEX Portal (Tissue expression)RMND1
Human Protein AtlasENSG00000155906-RMND1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NWS8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NWS8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NWS8
Splice isoforms : SwissVarQ9NWS8
PhosPhoSitePlusQ9NWS8
Domains : Interpro (EBI)DUF155   
Domain families : Pfam (Sanger)DUF155 (PF02582)   
Domain families : Pfam (NCBI)pfam02582   
Conserved Domain (NCBI)RMND1
DMDM Disease mutations55005
Blocks (Seattle)RMND1
SuperfamilyQ9NWS8
Human Protein Atlas [tissue]ENSG00000155906-RMND1 [tissue]
Peptide AtlasQ9NWS8
HPRD09858
IPIIPI00329591   IPI00643249   IPI00735279   IPI00843752   IPI00647101   
Protein Interaction databases
DIP (DOE-UCLA)Q9NWS8
IntAct (EBI)Q9NWS8
FunCoupENSG00000155906
BioGRIDRMND1
STRING (EMBL)RMND1
ZODIACRMND1
Ontologies - Pathways
QuickGOQ9NWS8
Ontology : AmiGOprotein binding  mitochondrion  translation  positive regulation of mitochondrial translation  
Ontology : EGO-EBIprotein binding  mitochondrion  translation  positive regulation of mitochondrial translation  
NDEx NetworkRMND1
Atlas of Cancer Signalling NetworkRMND1
Wikipedia pathwaysRMND1
Orthology - Evolution
OrthoDB55005
GeneTree (enSembl)ENSG00000155906
Phylogenetic Trees/Animal Genes : TreeFamRMND1
HOVERGENQ9NWS8
HOGENOMQ9NWS8
Homologs : HomoloGeneRMND1
Homology/Alignments : Family Browser (UCSC)RMND1
Gene fusions - Rearrangements
Fusion : QuiverRMND1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRMND1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RMND1
dbVarRMND1
ClinVarRMND1
1000_GenomesRMND1 
Exome Variant ServerRMND1
ExAC (Exome Aggregation Consortium)ENSG00000155906
GNOMAD BrowserENSG00000155906
Varsome BrowserRMND1
Genetic variants : HAPMAP55005
Genomic Variants (DGV)RMND1 [DGVbeta]
DECIPHERRMND1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRMND1 
Mutations
ICGC Data PortalRMND1 
TCGA Data PortalRMND1 
Broad Tumor PortalRMND1
OASIS PortalRMND1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRMND1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRMND1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch RMND1
DgiDB (Drug Gene Interaction Database)RMND1
DoCM (Curated mutations)RMND1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RMND1 (select a term)
intoGenRMND1
Cancer3DRMND1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614917    614922   
Orphanet21783   
DisGeNETRMND1
MedgenRMND1
Genetic Testing Registry RMND1
NextProtQ9NWS8 [Medical]
TSGene55005
GENETestsRMND1
Target ValidationRMND1
Huge Navigator RMND1 [HugePedia]
snp3D : Map Gene to Disease55005
BioCentury BCIQRMND1
ClinGenRMND1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55005
Chemical/Pharm GKB GenePA162401372
Clinical trialRMND1
Miscellaneous
canSAR (ICR)RMND1 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRMND1
EVEXRMND1
GoPubMedRMND1
iHOPRMND1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 6 11:35:47 CET 2018

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