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RMST (rhabdomyosarcoma 2 associated transcript (non-protein coding))

Identity

Alias_symbol (synonym)NCRMS
NCRNA00054
LINC00054
Other alias
HGNC (Hugo) RMST
LocusID (NCBI) 196475
Atlas_Id 41510
Location 12q23.1  [Link to chromosome band 12q23]
Location_base_pair Starts at 97465021 and ends at 97533766 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
RMST (12q23.1) / NEGR1 (1p31.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RMST   29893
Cards
Entrez_Gene (NCBI)RMST  196475  rhabdomyosarcoma 2 associated transcript (non-protein coding)
AliasesLINC00054; NCRMS; NCRNA00054
GeneCards (Weizmann)RMST
Ensembl hg19 (Hinxton)ENSG00000255794 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255794 [Gene_View]  chr12:97465021-97533766 [Contig_View]  RMST [Vega]
ICGC DataPortalENSG00000255794
TCGA cBioPortalRMST
AceView (NCBI)RMST
Genatlas (Paris)RMST
WikiGenes196475
SOURCE (Princeton)RMST
Genetics Home Reference (NIH)RMST
Genomic and cartography
GoldenPath hg38 (UCSC)RMST  -     chr12:97465021-97533766 +  12q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RMST  -     12q23.1   [Description]    (hg19-Feb_2009)
EnsemblRMST - 12q23.1 [CytoView hg19]  RMST - 12q23.1 [CytoView hg38]
Mapping of homologs : NCBIRMST [Mapview hg19]  RMST [Mapview hg38]
OMIM607045   
Gene and transcription
Genbank (Entrez)AF429305 AF429306 AK056164
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RMST
Cluster EST : UnigeneHs.652568 [ NCBI ]
CGAP (NCI)Hs.652568
Alternative Splicing GalleryENSG00000255794
Gene ExpressionRMST [ NCBI-GEO ]   RMST [ EBI - ARRAY_EXPRESS ]   RMST [ SEEK ]   RMST [ MEM ]
Gene Expression Viewer (FireBrowse)RMST [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)196475
GTEX Portal (Tissue expression)RMST
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RMST
DMDM Disease mutations196475
Blocks (Seattle)RMST
Human Protein AtlasENSG00000255794
Protein Interaction databases
FunCoupENSG00000255794
BioGRIDRMST
STRING (EMBL)RMST
ZODIACRMST
Ontologies - Pathways
Huge Navigator RMST [HugePedia]
snp3D : Map Gene to Disease196475
BioCentury BCIQRMST
ClinGenRMST
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD196475
Chemical/Pharm GKB GenePA143485596
Clinical trialRMST
Miscellaneous
canSAR (ICR)RMST (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRMST
EVEXRMST
GoPubMedRMST
iHOPRMST
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 12:35:08 CEST 2017

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