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RN7SKP23 (RNA, 7SK small nuclear pseudogene 23)

Identity

Other alias-
HGNC (Hugo) RN7SKP23
LocusID (NCBI) 106479105
Atlas_Id 78610
Location 16p12.2  [Link to chromosome band 16p12]
Location_base_pair Starts at 23412371 and ends at 23416680 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)RN7SKP23   45747
Cards
Entrez_Gene (NCBI)RN7SKP23  106479105  RNA, 7SK small nuclear pseudogene 23
Aliases
GeneCards (Weizmann)RN7SKP23
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:23412371-23416680 [Contig_View]  RN7SKP23 [Vega]
TCGA cBioPortalRN7SKP23
AceView (NCBI)RN7SKP23
Genatlas (Paris)RN7SKP23
WikiGenes106479105
SOURCE (Princeton)RN7SKP23
Genetics Home Reference (NIH)RN7SKP23
Genomic and cartography
GoldenPath hg38 (UCSC)RN7SKP23  -     chr16:23412371-23416680 +  16p12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RN7SKP23  -     16p12.2   [Description]    (hg19-Feb_2009)
EnsemblRN7SKP23 - 16p12.2 [CytoView hg19]  RN7SKP23 - 16p12.2 [CytoView hg38]
Mapping of homologs : NCBIRN7SKP23 [Mapview hg19]  RN7SKP23 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126661
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RN7SKP23
Cluster EST : UnigeneHs.185807 [ NCBI ]
CGAP (NCI)Hs.185807
Gene ExpressionRN7SKP23 [ NCBI-GEO ]   RN7SKP23 [ EBI - ARRAY_EXPRESS ]   RN7SKP23 [ SEEK ]   RN7SKP23 [ MEM ]
Gene Expression Viewer (FireBrowse)RN7SKP23 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106479105
GTEX Portal (Tissue expression)RN7SKP23
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RN7SKP23
DMDM Disease mutations106479105
Blocks (Seattle)RN7SKP23
Protein Interaction databases
BioGRIDRN7SKP23
STRING (EMBL)RN7SKP23
ZODIACRN7SKP23
Ontologies - Pathways
Huge Navigator RN7SKP23 [HugePedia]
snp3D : Map Gene to Disease106479105
BioCentury BCIQRN7SKP23
ClinGenRN7SKP23
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106479105
Clinical trialRN7SKP23
Miscellaneous
canSAR (ICR)RN7SKP23 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineRN7SKP23
EVEXRN7SKP23
GoPubMedRN7SKP23
iHOPRN7SKP23
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:34:14 CET 2017

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