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RNA18SN5 (RNA, 18S ribosomal N5)

Identity

Other aliasRN18S1
RNA18S5
HGNC (Hugo) RNA18SN5
LocusID (NCBI) 100008588
Atlas_Id 79590
Location 21p11.2  [Link to chromosome band 21p11]
Location_base_pair Starts at 8209631 and ends at 8211499 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)RNA18SN5   53531
Cards
Entrez_Gene (NCBI)RNA18SN5  100008588  RNA, 18S ribosomal N5
AliasesRN18S1; RNA18S5
GeneCards (Weizmann)RNA18SN5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:8209631-8211499 [Contig_View]  RNA18SN5 [Vega]
TCGA cBioPortalRNA18SN5
AceView (NCBI)RNA18SN5
Genatlas (Paris)RNA18SN5
WikiGenes100008588
SOURCE (Princeton)RNA18SN5
Genetics Home Reference (NIH)RNA18SN5
Genomic and cartography
GoldenPath hg38 (UCSC)RNA18SN5  -     chr21:8209631-8211499 +  21p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNA18SN5  -     21p11.2   [Description]    (hg19-Feb_2009)
EnsemblRNA18SN5 - 21p11.2 [CytoView hg19]  RNA18SN5 - 21p11.2 [CytoView hg38]
Mapping of homologs : NCBIRNA18SN5 [Mapview hg19]  RNA18SN5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_018932 NT_167214
Consensus coding sequences : CCDS (NCBI)RNA18SN5
Gene ExpressionRNA18SN5 [ NCBI-GEO ]   RNA18SN5 [ EBI - ARRAY_EXPRESS ]   RNA18SN5 [ SEEK ]   RNA18SN5 [ MEM ]
Gene Expression Viewer (FireBrowse)RNA18SN5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100008588
GTEX Portal (Tissue expression)RNA18SN5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNA18SN5
DMDM Disease mutations100008588
Blocks (Seattle)RNA18SN5
Protein Interaction databases
BioGRIDRNA18SN5
STRING (EMBL)RNA18SN5
ZODIACRNA18SN5
Ontologies - Pathways
Huge Navigator RNA18SN5 [HugePedia]
snp3D : Map Gene to Disease100008588
BioCentury BCIQRNA18SN5
ClinGenRNA18SN5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100008588
Chemical/Pharm GKB GenePA165378364
Clinical trialRNA18SN5
Miscellaneous
canSAR (ICR)RNA18SN5 (select the gene name)
Probes
Litterature
PubMed38 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNA18SN5
EVEXRNA18SN5
GoPubMedRNA18SN5
iHOPRNA18SN5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:59:10 CET 2017

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