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RNA18SP3 (RNA, 18S ribosomal pseudogene 3)

Identity

Other alias-
HGNC (Hugo) RNA18SP3
LocusID (NCBI) 109864277
Atlas_Id 79986
Location 21p11.2  [Link to chromosome band 21p11]
Location_base_pair Starts at 8209631 and ends at 8211499 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)RNA18SP3   53534
Cards
Entrez_Gene (NCBI)RNA18SP3  109864277  RNA, 18S ribosomal pseudogene 3
Aliases
GeneCards (Weizmann)RNA18SP3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:8209631-8211499 [Contig_View]  RNA18SP3 [Vega]
TCGA cBioPortalRNA18SP3
AceView (NCBI)RNA18SP3
Genatlas (Paris)RNA18SP3
WikiGenes109864277
SOURCE (Princeton)RNA18SP3
Genetics Home Reference (NIH)RNA18SP3
Genomic and cartography
GoldenPath hg38 (UCSC)RNA18SP3  -     chr21:8209631-8211499 +  21p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNA18SP3  -     21p11.2   [Description]    (hg19-Feb_2009)
EnsemblRNA18SP3 - 21p11.2 [CytoView hg19]  RNA18SP3 - 21p11.2 [CytoView hg38]
Mapping of homologs : NCBIRNA18SP3 [Mapview hg19]  RNA18SP3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNA18SP3
Gene ExpressionRNA18SP3 [ NCBI-GEO ]   RNA18SP3 [ EBI - ARRAY_EXPRESS ]   RNA18SP3 [ SEEK ]   RNA18SP3 [ MEM ]
Gene Expression Viewer (FireBrowse)RNA18SP3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109864277
GTEX Portal (Tissue expression)RNA18SP3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNA18SP3
DMDM Disease mutations109864277
Blocks (Seattle)RNA18SP3
Protein Interaction databases
BioGRIDRNA18SP3
STRING (EMBL)RNA18SP3
ZODIACRNA18SP3
Ontologies - Pathways
Huge Navigator RNA18SP3 [HugePedia]
snp3D : Map Gene to Disease109864277
BioCentury BCIQRNA18SP3
ClinGenRNA18SP3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109864277
Clinical trialRNA18SP3
Miscellaneous
canSAR (ICR)RNA18SP3 (select the gene name)
Probes
Litterature
PubMed33 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNA18SP3
EVEXRNA18SP3
GoPubMedRNA18SP3
iHOPRNA18SP3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:44:14 CET 2017

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