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RNA18SP5 (RNA, 18S ribosomal pseudogene 5)

Identity

Other alias-
HGNC (Hugo) RNA18SP5
LocusID (NCBI) 109910383
Atlas_Id 79139
Location 21p11.2  [Link to chromosome band 21p11]
Location_base_pair Starts at 8253842 and ends at 8255704 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)RNA18SP5   53558
Cards
Entrez_Gene (NCBI)RNA18SP5  109910383  RNA, 18S ribosomal pseudogene 5
Aliases
GeneCards (Weizmann)RNA18SP5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:8253842-8255704 [Contig_View]  RNA18SP5 [Vega]
TCGA cBioPortalRNA18SP5
AceView (NCBI)RNA18SP5
Genatlas (Paris)RNA18SP5
WikiGenes109910383
SOURCE (Princeton)RNA18SP5
Genetics Home Reference (NIH)RNA18SP5
Genomic and cartography
GoldenPath hg38 (UCSC)RNA18SP5  -     chr21:8253842-8255704 +  21p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNA18SP5  -     21p11.2   [Description]    (hg19-Feb_2009)
EnsemblRNA18SP5 - 21p11.2 [CytoView hg19]  RNA18SP5 - 21p11.2 [CytoView hg38]
Mapping of homologs : NCBIRNA18SP5 [Mapview hg19]  RNA18SP5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNA18SP5
Gene ExpressionRNA18SP5 [ NCBI-GEO ]   RNA18SP5 [ EBI - ARRAY_EXPRESS ]   RNA18SP5 [ SEEK ]   RNA18SP5 [ MEM ]
Gene Expression Viewer (FireBrowse)RNA18SP5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109910383
GTEX Portal (Tissue expression)RNA18SP5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNA18SP5
DMDM Disease mutations109910383
Blocks (Seattle)RNA18SP5
Protein Interaction databases
BioGRIDRNA18SP5
STRING (EMBL)RNA18SP5
ZODIACRNA18SP5
Ontologies - Pathways
Huge Navigator RNA18SP5 [HugePedia]
snp3D : Map Gene to Disease109910383
BioCentury BCIQRNA18SP5
ClinGenRNA18SP5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109910383
Clinical trialRNA18SP5
Miscellaneous
canSAR (ICR)RNA18SP5 (select the gene name)
Probes
Litterature
PubMed33 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNA18SP5
EVEXRNA18SP5
GoPubMedRNA18SP5
iHOPRNA18SP5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:43:13 CET 2017

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