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RNA45SN5 (RNA, 45S pre-ribosomal N5)

Identity

Other aliasRNA45S5
HGNC (Hugo) RNA45SN5
LocusID (NCBI) 100861532
Atlas_Id 78959
Location 21p11.2  [Link to chromosome band 21p11]
Location_base_pair Starts at 8433222 and ends at 8446572 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)RNA45SN5   53530
Cards
Entrez_Gene (NCBI)RNA45SN5  100861532  RNA, 45S pre-ribosomal N5
AliasesRNA45S5
GeneCards (Weizmann)RNA45SN5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:8433222-8446572 [Contig_View]  RNA45SN5 [Vega]
TCGA cBioPortalRNA45SN5
AceView (NCBI)RNA45SN5
Genatlas (Paris)RNA45SN5
WikiGenes100861532
SOURCE (Princeton)RNA45SN5
Genetics Home Reference (NIH)RNA45SN5
Genomic and cartography
GoldenPath hg38 (UCSC)RNA45SN5  -     chr21:8433222-8446572 +  21p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNA45SN5  -     21p11.2   [Description]    (hg19-Feb_2009)
EnsemblRNA45SN5 - 21p11.2 [CytoView hg19]  RNA45SN5 - 21p11.2 [CytoView hg38]
Mapping of homologs : NCBIRNA45SN5 [Mapview hg19]  RNA45SN5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_018912 NC_018932 NT_167214
Consensus coding sequences : CCDS (NCBI)RNA45SN5
Gene ExpressionRNA45SN5 [ NCBI-GEO ]   RNA45SN5 [ EBI - ARRAY_EXPRESS ]   RNA45SN5 [ SEEK ]   RNA45SN5 [ MEM ]
Gene Expression Viewer (FireBrowse)RNA45SN5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100861532
GTEX Portal (Tissue expression)RNA45SN5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNA45SN5
DMDM Disease mutations100861532
Blocks (Seattle)RNA45SN5
Protein Interaction databases
BioGRIDRNA45SN5
STRING (EMBL)RNA45SN5
ZODIACRNA45SN5
Ontologies - Pathways
Huge Navigator RNA45SN5 [HugePedia]
snp3D : Map Gene to Disease100861532
BioCentury BCIQRNA45SN5
ClinGenRNA45SN5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100861532
Clinical trialRNA45SN5
Miscellaneous
canSAR (ICR)RNA45SN5 (select the gene name)
Probes
Litterature
PubMed33 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNA45SN5
EVEXRNA45SN5
GoPubMedRNA45SN5
iHOPRNA45SN5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:59:10 CET 2017

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