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RNA5-8SP10 (RNA, 5.8S ribosomal pseudogene 10)

Identity

Other alias-
HGNC (Hugo) RNA5-8SP10
LocusID (NCBI) 109910384
Atlas_Id 80213
Location 21p11.2  [Link to chromosome band 21p11]
Location_base_pair Starts at 8212571 and ends at 8212727 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)RNA5-8SP10   53559
Cards
Entrez_Gene (NCBI)RNA5-8SP10  109910384  RNA, 5.8S ribosomal pseudogene 10
Aliases
GeneCards (Weizmann)RNA5-8SP10
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:8212571-8212727 [Contig_View]  RNA5-8SP10 [Vega]
TCGA cBioPortalRNA5-8SP10
AceView (NCBI)RNA5-8SP10
Genatlas (Paris)RNA5-8SP10
WikiGenes109910384
SOURCE (Princeton)RNA5-8SP10
Genetics Home Reference (NIH)RNA5-8SP10
Genomic and cartography
GoldenPath hg38 (UCSC)RNA5-8SP10  -     chr21:8212571-8212727 +  21p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNA5-8SP10  -     21p11.2   [Description]    (hg19-Feb_2009)
EnsemblRNA5-8SP10 - 21p11.2 [CytoView hg19]  RNA5-8SP10 - 21p11.2 [CytoView hg38]
Mapping of homologs : NCBIRNA5-8SP10 [Mapview hg19]  RNA5-8SP10 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNA5-8SP10
Gene ExpressionRNA5-8SP10 [ NCBI-GEO ]   RNA5-8SP10 [ EBI - ARRAY_EXPRESS ]   RNA5-8SP10 [ SEEK ]   RNA5-8SP10 [ MEM ]
Gene Expression Viewer (FireBrowse)RNA5-8SP10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109910384
GTEX Portal (Tissue expression)RNA5-8SP10
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNA5-8SP10
DMDM Disease mutations109910384
Blocks (Seattle)RNA5-8SP10
<TH>Protein Interaction databases
BioGRIDRNA5-8SP10
STRING (EMBL)RNA5-8SP10
ZODIACRNA5-8SP10
Ontologies - Pathways
Huge Navigator RNA5-8SP10 [HugePedia]
snp3D : Map Gene to Disease109910384
BioCentury BCIQRNA5-8SP10
ClinGenRNA5-8SP10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109910384
Clinical trialRNA5-8SP10
Miscellaneous
canSAR (ICR)RNA5-8SP10 (select the gene name)
Probes
Litterature
PubMed33 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNA5-8SP10
EVEXRNA5-8SP10
GoPubMedRNA5-8SP10
iHOPRNA5-8SP10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:43:15 CET 2017

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