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RNA5S10 (RNA, 5S ribosomal 10)

Identity

Alias_namesRN5S10
Other alias
HGNC (Hugo) RNA5S10
LocusID (NCBI) 100169761
Atlas_Id 79181
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 228610266 and ends at 228610386 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNA5S10   34371
Cards
Entrez_Gene (NCBI)RNA5S10  100169761  RNA, 5S ribosomal 10
AliasesRN5S10
GeneCards (Weizmann)RNA5S10
Ensembl hg19 (Hinxton)ENSG00000199910 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000199910 [Gene_View]  chr1:228610266-228610386 [Contig_View]  RNA5S10 [Vega]
ICGC DataPortalENSG00000199910
TCGA cBioPortalRNA5S10
AceView (NCBI)RNA5S10
Genatlas (Paris)RNA5S10
WikiGenes100169761
SOURCE (Princeton)RNA5S10
Genetics Home Reference (NIH)RNA5S10
Genomic and cartography
GoldenPath hg38 (UCSC)RNA5S10  -     chr1:228610266-228610386 -  1q42.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNA5S10  -     1q42.13   [Description]    (hg19-Feb_2009)
EnsemblRNA5S10 - 1q42.13 [CytoView hg19]  RNA5S10 - 1q42.13 [CytoView hg38]
Mapping of homologs : NCBIRNA5S10 [Mapview hg19]  RNA5S10 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNA5S10
Alternative Splicing GalleryENSG00000199910
Gene ExpressionRNA5S10 [ NCBI-GEO ]   RNA5S10 [ EBI - ARRAY_EXPRESS ]   RNA5S10 [ SEEK ]   RNA5S10 [ MEM ]
Gene Expression Viewer (FireBrowse)RNA5S10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100169761
GTEX Portal (Tissue expression)RNA5S10
Human Protein AtlasENSG00000199910-RNA5S10 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNA5S10
DMDM Disease mutations100169761
Blocks (Seattle)RNA5S10
Human Protein Atlas [tissue]ENSG00000199910-RNA5S10 [tissue]
Protein Interaction databases
FunCoupENSG00000199910
BioGRIDRNA5S10
STRING (EMBL)RNA5S10
ZODIACRNA5S10
Ontologies - Pathways
Huge Navigator RNA5S10 [HugePedia]
snp3D : Map Gene to Disease100169761
BioCentury BCIQRNA5S10
ClinGenRNA5S10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100169761
Chemical/Pharm GKB GenePA162401402
Clinical trialRNA5S10
Miscellaneous
canSAR (ICR)RNA5S10 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNA5S10
EVEXRNA5S10
GoPubMedRNA5S10
iHOPRNA5S10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 20:09:54 CET 2017

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