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RNA5S12 (RNA, 5S ribosomal 12)

Identity

Alias_namesRN5S12
Other alias
HGNC (Hugo) RNA5S12
LocusID (NCBI) 100169763
Atlas_Id 80206
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 228610266 and ends at 228610386 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNA5S12   34373
Cards
Entrez_Gene (NCBI)RNA5S12  100169763  RNA, 5S ribosomal 12
AliasesRN5S12
GeneCards (Weizmann)RNA5S12
Ensembl hg19 (Hinxton)ENSG00000199270 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000199270 [Gene_View]  chr1:228610266-228610386 [Contig_View]  RNA5S12 [Vega]
ICGC DataPortalENSG00000199270
TCGA cBioPortalRNA5S12
AceView (NCBI)RNA5S12
Genatlas (Paris)RNA5S12
WikiGenes100169763
SOURCE (Princeton)RNA5S12
Genetics Home Reference (NIH)RNA5S12
Genomic and cartography
GoldenPath hg38 (UCSC)RNA5S12  -     chr1:228610266-228610386 -  1q42.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNA5S12  -     1q42.13   [Description]    (hg19-Feb_2009)
EnsemblRNA5S12 - 1q42.13 [CytoView hg19]  RNA5S12 - 1q42.13 [CytoView hg38]
Mapping of homologs : NCBIRNA5S12 [Mapview hg19]  RNA5S12 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNA5S12
Alternative Splicing GalleryENSG00000199270
Gene ExpressionRNA5S12 [ NCBI-GEO ]   RNA5S12 [ EBI - ARRAY_EXPRESS ]   RNA5S12 [ SEEK ]   RNA5S12 [ MEM ]
Gene Expression Viewer (FireBrowse)RNA5S12 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100169763
GTEX Portal (Tissue expression)RNA5S12
Human Protein AtlasENSG00000199270-RNA5S12 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNA5S12
DMDM Disease mutations100169763
Blocks (Seattle)RNA5S12
Human Protein Atlas [tissue]ENSG00000199270-RNA5S12 [tissue]
Protein Interaction databases
FunCoupENSG00000199270
BioGRIDRNA5S12
STRING (EMBL)RNA5S12
ZODIACRNA5S12
Ontologies - Pathways
Huge Navigator RNA5S12 [HugePedia]
snp3D : Map Gene to Disease100169763
BioCentury BCIQRNA5S12
ClinGenRNA5S12
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100169763
Chemical/Pharm GKB GenePA162401404
Clinical trialRNA5S12
Miscellaneous
canSAR (ICR)RNA5S12 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNA5S12
EVEXRNA5S12
GoPubMedRNA5S12
iHOPRNA5S12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 20:09:55 CET 2017

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