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RNA5S13 (RNA, 5S ribosomal 13)

Identity

Alias_namesRN5S13
Other alias
HGNC (Hugo) RNA5S13
LocusID (NCBI) 100169764
Atlas_Id 79342
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 228610266 and ends at 228610386 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNA5S13   34374
Cards
Entrez_Gene (NCBI)RNA5S13  100169764  RNA, 5S ribosomal 13
AliasesRN5S13
GeneCards (Weizmann)RNA5S13
Ensembl hg19 (Hinxton)ENSG00000202526 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000202526 [Gene_View]  chr1:228610266-228610386 [Contig_View]  RNA5S13 [Vega]
ICGC DataPortalENSG00000202526
TCGA cBioPortalRNA5S13
AceView (NCBI)RNA5S13
Genatlas (Paris)RNA5S13
WikiGenes100169764
SOURCE (Princeton)RNA5S13
Genetics Home Reference (NIH)RNA5S13
Genomic and cartography
GoldenPath hg38 (UCSC)RNA5S13  -     chr1:228610266-228610386 -  1q42.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNA5S13  -     1q42.13   [Description]    (hg19-Feb_2009)
EnsemblRNA5S13 - 1q42.13 [CytoView hg19]  RNA5S13 - 1q42.13 [CytoView hg38]
Mapping of homologs : NCBIRNA5S13 [Mapview hg19]  RNA5S13 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNA5S13
Alternative Splicing GalleryENSG00000202526
Gene ExpressionRNA5S13 [ NCBI-GEO ]   RNA5S13 [ EBI - ARRAY_EXPRESS ]   RNA5S13 [ SEEK ]   RNA5S13 [ MEM ]
Gene Expression Viewer (FireBrowse)RNA5S13 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100169764
GTEX Portal (Tissue expression)RNA5S13
Human Protein AtlasENSG00000202526-RNA5S13 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNA5S13
DMDM Disease mutations100169764
Blocks (Seattle)RNA5S13
Human Protein Atlas [tissue]ENSG00000202526-RNA5S13 [tissue]
Protein Interaction databases
FunCoupENSG00000202526
BioGRIDRNA5S13
STRING (EMBL)RNA5S13
ZODIACRNA5S13
Ontologies - Pathways
Huge Navigator RNA5S13 [HugePedia]
snp3D : Map Gene to Disease100169764
BioCentury BCIQRNA5S13
ClinGenRNA5S13
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100169764
Chemical/Pharm GKB GenePA162401405
Clinical trialRNA5S13
Miscellaneous
canSAR (ICR)RNA5S13 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNA5S13
EVEXRNA5S13
GoPubMedRNA5S13
iHOPRNA5S13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:02:34 CET 2017

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