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RNA5S15 (RNA, 5S ribosomal 15)

Identity

Alias_namesRN5S15
Other alias
HGNC (Hugo) RNA5S15
LocusID (NCBI) 100169766
Atlas_Id 79606
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 228610266 and ends at 228610386 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNA5S15   34376
Cards
Entrez_Gene (NCBI)RNA5S15  100169766  RNA, 5S ribosomal 15
AliasesRN5S15
GeneCards (Weizmann)RNA5S15
Ensembl hg19 (Hinxton)ENSG00000201925 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000201925 [Gene_View]  chr1:228610266-228610386 [Contig_View]  RNA5S15 [Vega]
ICGC DataPortalENSG00000201925
TCGA cBioPortalRNA5S15
AceView (NCBI)RNA5S15
Genatlas (Paris)RNA5S15
WikiGenes100169766
SOURCE (Princeton)RNA5S15
Genetics Home Reference (NIH)RNA5S15
Genomic and cartography
GoldenPath hg38 (UCSC)RNA5S15  -     chr1:228610266-228610386 -  1q42.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNA5S15  -     1q42.13   [Description]    (hg19-Feb_2009)
EnsemblRNA5S15 - 1q42.13 [CytoView hg19]  RNA5S15 - 1q42.13 [CytoView hg38]
Mapping of homologs : NCBIRNA5S15 [Mapview hg19]  RNA5S15 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNA5S15
Alternative Splicing GalleryENSG00000201925
Gene ExpressionRNA5S15 [ NCBI-GEO ]   RNA5S15 [ EBI - ARRAY_EXPRESS ]   RNA5S15 [ SEEK ]   RNA5S15 [ MEM ]
Gene Expression Viewer (FireBrowse)RNA5S15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100169766
GTEX Portal (Tissue expression)RNA5S15
Human Protein AtlasENSG00000201925-RNA5S15 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNA5S15
DMDM Disease mutations100169766
Blocks (Seattle)RNA5S15
Human Protein Atlas [tissue]ENSG00000201925-RNA5S15 [tissue]
Protein Interaction databases
FunCoupENSG00000201925
BioGRIDRNA5S15
STRING (EMBL)RNA5S15
ZODIACRNA5S15
Ontologies - Pathways
Huge Navigator RNA5S15 [HugePedia]
snp3D : Map Gene to Disease100169766
BioCentury BCIQRNA5S15
ClinGenRNA5S15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100169766
Chemical/Pharm GKB GenePA162401407
Clinical trialRNA5S15
Miscellaneous
canSAR (ICR)RNA5S15 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNA5S15
EVEXRNA5S15
GoPubMedRNA5S15
iHOPRNA5S15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:02:34 CET 2017

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