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RNA5S3 (RNA, 5S ribosomal 3)

Identity

Alias_namesRN5S3
Other alias
HGNC (Hugo) RNA5S3
LocusID (NCBI) 100169754
Atlas_Id 79306
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 228610266 and ends at 228610386 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNA5S3   34364
Cards
Entrez_Gene (NCBI)RNA5S3  100169754  RNA, 5S ribosomal 3
AliasesRN5S3
GeneCards (Weizmann)RNA5S3
Ensembl hg19 (Hinxton)ENSG00000199337 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000199337 [Gene_View]  chr1:228610266-228610386 [Contig_View]  RNA5S3 [Vega]
ICGC DataPortalENSG00000199337
TCGA cBioPortalRNA5S3
AceView (NCBI)RNA5S3
Genatlas (Paris)RNA5S3
WikiGenes100169754
SOURCE (Princeton)RNA5S3
Genetics Home Reference (NIH)RNA5S3
Genomic and cartography
GoldenPath hg38 (UCSC)RNA5S3  -     chr1:228610266-228610386 -  1q42.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNA5S3  -     1q42.13   [Description]    (hg19-Feb_2009)
EnsemblRNA5S3 - 1q42.13 [CytoView hg19]  RNA5S3 - 1q42.13 [CytoView hg38]
Mapping of homologs : NCBIRNA5S3 [Mapview hg19]  RNA5S3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNA5S3
Alternative Splicing GalleryENSG00000199337
Gene ExpressionRNA5S3 [ NCBI-GEO ]   RNA5S3 [ EBI - ARRAY_EXPRESS ]   RNA5S3 [ SEEK ]   RNA5S3 [ MEM ]
Gene Expression Viewer (FireBrowse)RNA5S3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100169754
GTEX Portal (Tissue expression)RNA5S3
Human Protein AtlasENSG00000199337-RNA5S3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNA5S3
DMDM Disease mutations100169754
Blocks (Seattle)RNA5S3
Human Protein Atlas [tissue]ENSG00000199337-RNA5S3 [tissue]
Protein Interaction databases
FunCoupENSG00000199337
BioGRIDRNA5S3
STRING (EMBL)RNA5S3
ZODIACRNA5S3
Ontologies - Pathways
Huge Navigator RNA5S3 [HugePedia]
snp3D : Map Gene to Disease100169754
BioCentury BCIQRNA5S3
ClinGenRNA5S3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100169754
Chemical/Pharm GKB GenePA162401411
Clinical trialRNA5S3
Miscellaneous
canSAR (ICR)RNA5S3 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNA5S3
EVEXRNA5S3
GoPubMedRNA5S3
iHOPRNA5S3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:02:35 CET 2017

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