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RNA5S7 (RNA, 5S ribosomal 7)

Identity

Alias_namesRN5S7
Other alias
HGNC (Hugo) RNA5S7
LocusID (NCBI) 100169758
Atlas_Id 79744
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 228610266 and ends at 228610386 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNA5S7   34368
Cards
Entrez_Gene (NCBI)RNA5S7  100169758  RNA, 5S ribosomal 7
AliasesRN5S7
GeneCards (Weizmann)RNA5S7
Ensembl hg19 (Hinxton)ENSG00000202521 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000202521 [Gene_View]  chr1:228610266-228610386 [Contig_View]  RNA5S7 [Vega]
ICGC DataPortalENSG00000202521
TCGA cBioPortalRNA5S7
AceView (NCBI)RNA5S7
Genatlas (Paris)RNA5S7
WikiGenes100169758
SOURCE (Princeton)RNA5S7
Genetics Home Reference (NIH)RNA5S7
Genomic and cartography
GoldenPath hg38 (UCSC)RNA5S7  -     chr1:228610266-228610386 -  1q42.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNA5S7  -     1q42.13   [Description]    (hg19-Feb_2009)
EnsemblRNA5S7 - 1q42.13 [CytoView hg19]  RNA5S7 - 1q42.13 [CytoView hg38]
Mapping of homologs : NCBIRNA5S7 [Mapview hg19]  RNA5S7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNA5S7
Alternative Splicing GalleryENSG00000202521
Gene ExpressionRNA5S7 [ NCBI-GEO ]   RNA5S7 [ EBI - ARRAY_EXPRESS ]   RNA5S7 [ SEEK ]   RNA5S7 [ MEM ]
Gene Expression Viewer (FireBrowse)RNA5S7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100169758
GTEX Portal (Tissue expression)RNA5S7
Human Protein AtlasENSG00000202521-RNA5S7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNA5S7
DMDM Disease mutations100169758
Blocks (Seattle)RNA5S7
Human Protein Atlas [tissue]ENSG00000202521-RNA5S7 [tissue]
Protein Interaction databases
FunCoupENSG00000202521
BioGRIDRNA5S7
STRING (EMBL)RNA5S7
ZODIACRNA5S7
Ontologies - Pathways
Huge Navigator RNA5S7 [HugePedia]
snp3D : Map Gene to Disease100169758
BioCentury BCIQRNA5S7
ClinGenRNA5S7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100169758
Chemical/Pharm GKB GenePA162401415
Clinical trialRNA5S7
Miscellaneous
canSAR (ICR)RNA5S7 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNA5S7
EVEXRNA5S7
GoPubMedRNA5S7
iHOPRNA5S7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:02:36 CET 2017

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