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RNA5S8 (RNA, 5S ribosomal 8)

Identity

Alias_namesRN5S8
Other alias
HGNC (Hugo) RNA5S8
LocusID (NCBI) 100169759
Atlas_Id 79505
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 228610266 and ends at 228610386 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNA5S8   34369
Cards
Entrez_Gene (NCBI)RNA5S8  100169759  RNA, 5S ribosomal 8
AliasesRN5S8
GeneCards (Weizmann)RNA5S8
Ensembl hg19 (Hinxton)ENSG00000200343 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000200343 [Gene_View]  chr1:228610266-228610386 [Contig_View]  RNA5S8 [Vega]
ICGC DataPortalENSG00000200343
TCGA cBioPortalRNA5S8
AceView (NCBI)RNA5S8
Genatlas (Paris)RNA5S8
WikiGenes100169759
SOURCE (Princeton)RNA5S8
Genetics Home Reference (NIH)RNA5S8
Genomic and cartography
GoldenPath hg38 (UCSC)RNA5S8  -     chr1:228610266-228610386 -  1q42.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNA5S8  -     1q42.13   [Description]    (hg19-Feb_2009)
EnsemblRNA5S8 - 1q42.13 [CytoView hg19]  RNA5S8 - 1q42.13 [CytoView hg38]
Mapping of homologs : NCBIRNA5S8 [Mapview hg19]  RNA5S8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNA5S8
Alternative Splicing GalleryENSG00000200343
Gene ExpressionRNA5S8 [ NCBI-GEO ]   RNA5S8 [ EBI - ARRAY_EXPRESS ]   RNA5S8 [ SEEK ]   RNA5S8 [ MEM ]
Gene Expression Viewer (FireBrowse)RNA5S8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100169759
GTEX Portal (Tissue expression)RNA5S8
Human Protein AtlasENSG00000200343-RNA5S8 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNA5S8
DMDM Disease mutations100169759
Blocks (Seattle)RNA5S8
Human Protein Atlas [tissue]ENSG00000200343-RNA5S8 [tissue]
Protein Interaction databases
FunCoupENSG00000200343
BioGRIDRNA5S8
STRING (EMBL)RNA5S8
ZODIACRNA5S8
Ontologies - Pathways
Huge Navigator RNA5S8 [HugePedia]
snp3D : Map Gene to Disease100169759
BioCentury BCIQRNA5S8
ClinGenRNA5S8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100169759
Chemical/Pharm GKB GenePA162401416
Clinical trialRNA5S8
Miscellaneous
canSAR (ICR)RNA5S8 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNA5S8
EVEXRNA5S8
GoPubMedRNA5S8
iHOPRNA5S8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 20:09:57 CET 2017

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