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RNA5S9 (RNA, 5S ribosomal 9)

Identity

Alias_namesRN5S9
Other alias
HGNC (Hugo) RNA5S9
LocusID (NCBI) 100169760
Atlas_Id 79132
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 228628146 and ends at 228628266 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNA5S9   34370
Cards
Entrez_Gene (NCBI)RNA5S9  100169760  RNA, 5S ribosomal 9
AliasesRN5S9
GeneCards (Weizmann)RNA5S9
Ensembl hg19 (Hinxton)ENSG00000201321 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000201321 [Gene_View]  chr1:228628146-228628266 [Contig_View]  RNA5S9 [Vega]
ICGC DataPortalENSG00000201321
TCGA cBioPortalRNA5S9
AceView (NCBI)RNA5S9
Genatlas (Paris)RNA5S9
WikiGenes100169760
SOURCE (Princeton)RNA5S9
Genetics Home Reference (NIH)RNA5S9
Genomic and cartography
GoldenPath hg38 (UCSC)RNA5S9  -     chr1:228628146-228628266 -  1q42.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNA5S9  -     1q42.13   [Description]    (hg19-Feb_2009)
EnsemblRNA5S9 - 1q42.13 [CytoView hg19]  RNA5S9 - 1q42.13 [CytoView hg38]
Mapping of homologs : NCBIRNA5S9 [Mapview hg19]  RNA5S9 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNA5S9
Alternative Splicing GalleryENSG00000201321
Gene ExpressionRNA5S9 [ NCBI-GEO ]   RNA5S9 [ EBI - ARRAY_EXPRESS ]   RNA5S9 [ SEEK ]   RNA5S9 [ MEM ]
Gene Expression Viewer (FireBrowse)RNA5S9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100169760
GTEX Portal (Tissue expression)RNA5S9
Human Protein AtlasENSG00000201321-RNA5S9 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNA5S9
DMDM Disease mutations100169760
Blocks (Seattle)RNA5S9
Human Protein Atlas [tissue]ENSG00000201321-RNA5S9 [tissue]
Protein Interaction databases
FunCoupENSG00000201321
BioGRIDRNA5S9
STRING (EMBL)RNA5S9
ZODIACRNA5S9
Ontologies - Pathways
Huge Navigator RNA5S9 [HugePedia]
snp3D : Map Gene to Disease100169760
BioCentury BCIQRNA5S9
ClinGenRNA5S9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100169760
Chemical/Pharm GKB GenePA162401417
Clinical trialRNA5S9
Miscellaneous
canSAR (ICR)RNA5S9 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNA5S9
EVEXRNA5S9
GoPubMedRNA5S9
iHOPRNA5S9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:02:36 CET 2017

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