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RNASE11 (ribonuclease A family member 11 (inactive))

Identity

Alias_namesC14orf6
chromosome 14 open reading frame 6
ribonuclease, RNase A family, 11 (non-active)
Alias_symbol (synonym)RAJ1
Other aliasHEL-S-84p
HGNC (Hugo) RNASE11
LocusID (NCBI) 122651
Atlas_Id 72664
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 20582893 and ends at 20590258 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNASE11   19269
Cards
Entrez_Gene (NCBI)RNASE11  122651  ribonuclease A family member 11 (inactive)
AliasesC14orf6; HEL-S-84p; RAJ1
GeneCards (Weizmann)RNASE11
Ensembl hg19 (Hinxton)ENSG00000259060 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259060 [Gene_View]  chr14:20582893-20590258 [Contig_View]  RNASE11 [Vega]
ICGC DataPortalENSG00000259060
TCGA cBioPortalRNASE11
AceView (NCBI)RNASE11
Genatlas (Paris)RNASE11
WikiGenes122651
SOURCE (Princeton)RNASE11
Genetics Home Reference (NIH)RNASE11
Genomic and cartography
GoldenPath hg38 (UCSC)RNASE11  -     chr14:20582893-20590258 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNASE11  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblRNASE11 - 14q11.2 [CytoView hg19]  RNASE11 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIRNASE11 [Mapview hg19]  RNASE11 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI809974 AK098687 AK292348 AK314065 AY358794
RefSeq transcript (Entrez)NM_145250
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNASE11
Cluster EST : UnigeneHs.112761 [ NCBI ]
CGAP (NCI)Hs.112761
Alternative Splicing GalleryENSG00000259060
Gene ExpressionRNASE11 [ NCBI-GEO ]   RNASE11 [ EBI - ARRAY_EXPRESS ]   RNASE11 [ SEEK ]   RNASE11 [ MEM ]
Gene Expression Viewer (FireBrowse)RNASE11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)122651
GTEX Portal (Tissue expression)RNASE11
Human Protein AtlasENSG00000259060-RNASE11 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TAA1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TAA1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TAA1
Splice isoforms : SwissVarQ8TAA1
Catalytic activity : Enzyme3.1.27.- [ Enzyme-Expasy ]   3.1.27.-3.1.27.- [ IntEnz-EBI ]   3.1.27.- [ BRENDA ]   3.1.27.- [ KEGG ]   
PhosPhoSitePlusQ8TAA1
Domains : Interpro (EBI)RNASE11    RNaseA    RNaseA_domain   
Domain families : Pfam (Sanger)RnaseA (PF00074)   
Domain families : Pfam (NCBI)pfam00074   
Domain structure : Prodom (Prabi Lyon)RNaseA (PD000535)   
Conserved Domain (NCBI)RNASE11
DMDM Disease mutations122651
Blocks (Seattle)RNASE11
SuperfamilyQ8TAA1
Human Protein Atlas [tissue]ENSG00000259060-RNASE11 [tissue]
Peptide AtlasQ8TAA1
HPRD15257
IPIIPI00152023   IPI00797143   IPI00795876   
Protein Interaction databases
DIP (DOE-UCLA)Q8TAA1
IntAct (EBI)Q8TAA1
FunCoupENSG00000259060
BioGRIDRNASE11
STRING (EMBL)RNASE11
ZODIACRNASE11
Ontologies - Pathways
QuickGOQ8TAA1
Ontology : AmiGOnucleic acid binding  endonuclease activity  ribonuclease activity  extracellular region  nucleic acid phosphodiester bond hydrolysis  
Ontology : EGO-EBInucleic acid binding  endonuclease activity  ribonuclease activity  extracellular region  nucleic acid phosphodiester bond hydrolysis  
NDEx NetworkRNASE11
Atlas of Cancer Signalling NetworkRNASE11
Wikipedia pathwaysRNASE11
Orthology - Evolution
OrthoDB122651
GeneTree (enSembl)ENSG00000259060
Phylogenetic Trees/Animal Genes : TreeFamRNASE11
HOVERGENQ8TAA1
HOGENOMQ8TAA1
Homologs : HomoloGeneRNASE11
Homology/Alignments : Family Browser (UCSC)RNASE11
Gene fusions - Rearrangements
Tumor Fusion PortalRNASE11
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRNASE11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RNASE11
dbVarRNASE11
ClinVarRNASE11
1000_GenomesRNASE11 
Exome Variant ServerRNASE11
ExAC (Exome Aggregation Consortium)ENSG00000259060
GNOMAD BrowserENSG00000259060
Genetic variants : HAPMAP122651
Genomic Variants (DGV)RNASE11 [DGVbeta]
DECIPHERRNASE11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRNASE11 
Mutations
ICGC Data PortalRNASE11 
TCGA Data PortalRNASE11 
Broad Tumor PortalRNASE11
OASIS PortalRNASE11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRNASE11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRNASE11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RNASE11
DgiDB (Drug Gene Interaction Database)RNASE11
DoCM (Curated mutations)RNASE11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RNASE11 (select a term)
intoGenRNASE11
Cancer3DRNASE11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETRNASE11
MedgenRNASE11
Genetic Testing Registry RNASE11
NextProtQ8TAA1 [Medical]
TSGene122651
GENETestsRNASE11
Target ValidationRNASE11
Huge Navigator RNASE11 [HugePedia]
snp3D : Map Gene to Disease122651
BioCentury BCIQRNASE11
ClinGenRNASE11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD122651
Chemical/Pharm GKB GenePA134929509
Clinical trialRNASE11
Miscellaneous
canSAR (ICR)RNASE11 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNASE11
EVEXRNASE11
GoPubMedRNASE11
iHOPRNASE11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:30:21 CET 2017

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