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RNASE9 (ribonuclease A family member 9 (inactive))

Identity

Alias_namesribonuclease, RNase A family, 9 (non-active)
Alias_symbol (synonym)h461
RAK1
Other aliasHEL128
HGNC (Hugo) RNASE9
LocusID (NCBI) 390443
Atlas_Id 72672
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 20556093 and ends at 20560931 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNASE9   20673
Cards
Entrez_Gene (NCBI)RNASE9  390443  ribonuclease A family member 9 (inactive)
AliasesHEL128; RAK1; h461
GeneCards (Weizmann)RNASE9
Ensembl hg19 (Hinxton)ENSG00000188655 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188655 [Gene_View]  chr14:20556093-20560931 [Contig_View]  RNASE9 [Vega]
ICGC DataPortalENSG00000188655
TCGA cBioPortalRNASE9
AceView (NCBI)RNASE9
Genatlas (Paris)RNASE9
WikiGenes390443
SOURCE (Princeton)RNASE9
Genetics Home Reference (NIH)RNASE9
Genomic and cartography
GoldenPath hg38 (UCSC)RNASE9  -     chr14:20556093-20560931 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNASE9  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblRNASE9 - 14q11.2 [CytoView hg19]  RNASE9 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIRNASE9 [Mapview hg19]  RNASE9 [Mapview hg38]
OMIM614014   
Gene and transcription
Genbank (Entrez)AF382949 AY665804 AY907670 BC130311 BC130313
RefSeq transcript (Entrez)NM_001001673 NM_001110356 NM_001110357 NM_001110358 NM_001110359 NM_001110360 NM_001110361 NM_001289110
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNASE9
Cluster EST : UnigeneHs.533972 [ NCBI ]
CGAP (NCI)Hs.533972
Alternative Splicing GalleryENSG00000188655
Gene ExpressionRNASE9 [ NCBI-GEO ]   RNASE9 [ EBI - ARRAY_EXPRESS ]   RNASE9 [ SEEK ]   RNASE9 [ MEM ]
Gene Expression Viewer (FireBrowse)RNASE9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390443
GTEX Portal (Tissue expression)RNASE9
Protein : pattern, domain, 3D structure
UniProt/SwissProtP60153   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP60153  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP60153
Splice isoforms : SwissVarP60153
PhosPhoSitePlusP60153
Domains : Interpro (EBI)RNASE9    RNaseA    RNaseA_domain   
Domain families : Pfam (Sanger)RnaseA (PF00074)   
Domain families : Pfam (NCBI)pfam00074   
Domain structure : Prodom (Prabi Lyon)RNaseA (PD000535)   
Conserved Domain (NCBI)RNASE9
DMDM Disease mutations390443
Blocks (Seattle)RNASE9
SuperfamilyP60153
Human Protein AtlasENSG00000188655
Peptide AtlasP60153
HPRD17983
IPIIPI00375936   IPI00876965   
Protein Interaction databases
DIP (DOE-UCLA)P60153
IntAct (EBI)P60153
FunCoupENSG00000188655
BioGRIDRNASE9
STRING (EMBL)RNASE9
ZODIACRNASE9
Ontologies - Pathways
QuickGOP60153
Ontology : AmiGOnucleic acid binding  endonuclease activity  ribonuclease activity  extracellular region  positive regulation of flagellated sperm motility involved in capacitation  nucleic acid phosphodiester bond hydrolysis  
Ontology : EGO-EBInucleic acid binding  endonuclease activity  ribonuclease activity  extracellular region  positive regulation of flagellated sperm motility involved in capacitation  nucleic acid phosphodiester bond hydrolysis  
NDEx NetworkRNASE9
Atlas of Cancer Signalling NetworkRNASE9
Wikipedia pathwaysRNASE9
Orthology - Evolution
OrthoDB390443
GeneTree (enSembl)ENSG00000188655
Phylogenetic Trees/Animal Genes : TreeFamRNASE9
HOVERGENP60153
HOGENOMP60153
Homologs : HomoloGeneRNASE9
Homology/Alignments : Family Browser (UCSC)RNASE9
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRNASE9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RNASE9
dbVarRNASE9
ClinVarRNASE9
1000_GenomesRNASE9 
Exome Variant ServerRNASE9
ExAC (Exome Aggregation Consortium)RNASE9 (select the gene name)
Genetic variants : HAPMAP390443
Genomic Variants (DGV)RNASE9 [DGVbeta]
DECIPHERRNASE9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRNASE9 
Mutations
ICGC Data PortalRNASE9 
TCGA Data PortalRNASE9 
Broad Tumor PortalRNASE9
OASIS PortalRNASE9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRNASE9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRNASE9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RNASE9
DgiDB (Drug Gene Interaction Database)RNASE9
DoCM (Curated mutations)RNASE9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RNASE9 (select a term)
intoGenRNASE9
Cancer3DRNASE9(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614014   
Orphanet
MedgenRNASE9
Genetic Testing Registry RNASE9
NextProtP60153 [Medical]
TSGene390443
GENETestsRNASE9
Target ValidationRNASE9
Huge Navigator RNASE9 [HugePedia]
snp3D : Map Gene to Disease390443
BioCentury BCIQRNASE9
ClinGenRNASE9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390443
Chemical/Pharm GKB GenePA134887351
Clinical trialRNASE9
Miscellaneous
canSAR (ICR)RNASE9 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNASE9
EVEXRNASE9
GoPubMedRNASE9
iHOPRNASE9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:38:48 CEST 2017

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