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RNASEH2B (ribonuclease H2, subunit B)

Identity

Other namesAGS2
DLEU8
HGNC (Hugo) RNASEH2B
LocusID (NCBI) 79621
Location 13q14.3
Location_base_pair Starts at 51483814 and ends at 51544596 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)RNASEH2B   25671
Cards
Entrez_Gene (NCBI)RNASEH2B  79621  ribonuclease H2, subunit B
GeneCards (Weizmann)RNASEH2B
Ensembl (Hinxton)ENSG00000136104 [Gene_View]  chr13:51483814-51544596 [Contig_View]  RNASEH2B [Vega]
AceView (NCBI)RNASEH2B
Genatlas (Paris)RNASEH2B
WikiGenes79621
SOURCE (Princeton)NM_001142279 NM_024570
Genomic and cartography
GoldenPath (UCSC)RNASEH2B  -  13q14.3   chr13:51483814-51544596 +  13q14.3   [Description]    (hg19-Feb_2009)
EnsemblRNASEH2B - 13q14.3 [CytoView]
Mapping of homologs : NCBIRNASEH2B [Mapview]
OMIM610181   610326   
Gene and transcription
Genbank (Entrez)AK021774 AK022667 AK124228 AK223340 AY764036
RefSeq transcript (Entrez)NM_001142279 NM_024570
RefSeq genomic (Entrez)AC_000145 NC_000013 NC_018924 NG_009055 NT_024524 NW_001838074 NW_004929388
Consensus coding sequences : CCDS (NCBI)RNASEH2B
Cluster EST : UnigeneHs.306291 [ NCBI ]
CGAP (NCI)Hs.306291
Alternative Splicing : Fast-db (Paris)GSHG0008124
Alternative Splicing GalleryENSG00000136104
Gene ExpressionRNASEH2B [ NCBI-GEO ]     RNASEH2B [ SEEK ]   RNASEH2B [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5TBB1 (Uniprot)
NextProtQ5TBB1  [Medical]
With graphics : InterProQ5TBB1
Splice isoforms : SwissVarQ5TBB1 (Swissvar)
Domains : Interpro (EBI)RNase_H2_suB   
Related proteins : CluSTrQ5TBB1
Domain families : Pfam (Sanger)RNase_H2-Ydr279 (PF09468)   
Domain families : Pfam (NCBI)pfam09468   
DMDM Disease mutations79621
Blocks (Seattle)Q5TBB1
PDB (SRS)3P56    3P87    3PUF   
PDB (PDBSum)3P56    3P87    3PUF   
PDB (IMB)3P56    3P87    3PUF   
PDB (RSDB)3P56    3P87    3PUF   
Human Protein AtlasENSG00000136104
Peptide AtlasQ5TBB1
IPIIPI01010943   IPI00245135   IPI00915437   
Protein Interaction databases
DIP (DOE-UCLA)Q5TBB1
IntAct (EBI)Q5TBB1
FunCoupENSG00000136104
BioGRIDRNASEH2B
InParanoidQ5TBB1
Interologous Interaction database Q5TBB1
IntegromeDBRNASEH2B
STRING (EMBL)RNASEH2B
Ontologies - Pathways
Ontology : AmiGOnucleus  nucleolus  RNA catabolic process  ribonuclease H2 complex  
Ontology : EGO-EBInucleus  nucleolus  RNA catabolic process  ribonuclease H2 complex  
Pathways : KEGGDNA replication   
REACTOMERNASEH2B
Protein Interaction DatabaseRNASEH2B
Wikipedia pathwaysRNASEH2B
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)RNASEH2B
SNP (GeneSNP Utah)RNASEH2B
SNP : HGBaseRNASEH2B
Genetic variants : HAPMAPRNASEH2B
1000_GenomesRNASEH2B 
ICGC programENSG00000136104 
Somatic Mutations in Cancer : COSMICRNASEH2B 
CONAN: Copy Number AnalysisRNASEH2B 
Mutations and Diseases : HGMDRNASEH2B
OMIM610181    610326   
GENETestsRNASEH2B
Disease Genetic AssociationRNASEH2B
Huge Navigator RNASEH2B [HugePedia]  RNASEH2B [HugeCancerGEM]
Genomic VariantsRNASEH2B  RNASEH2B [DGVbeta]
Exome VariantRNASEH2B
dbVarRNASEH2B
ClinVarRNASEH2B
snp3D : Map Gene to Disease79621
General knowledge
Homologs : HomoloGeneRNASEH2B
Homology/Alignments : Family Browser (UCSC)RNASEH2B
Phylogenetic Trees/Animal Genes : TreeFamRNASEH2B
Chemical/Protein Interactions : CTD79621
Chemical/Pharm GKB GenePA162401418
Clinical trialRNASEH2B
Cancer Resource (Charite)ENSG00000136104
Other databases
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
CoreMineRNASEH2B
iHOPRNASEH2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Apr 18 17:11:51 CEST 2014

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