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RND2 (Rho family GTPase 2)

Identity

Alias_namesARHN
ras homolog gene family, member N
Alias_symbol (synonym)Rho7
RhoN
Other aliasRHO7
HGNC (Hugo) RND2
LocusID (NCBI) 8153
Atlas_Id 72679
Location 17q21.31  [Link to chromosome band 17q21]
Location_base_pair Starts at 43025241 and ends at 43032041 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MRC2 (17q23.2) / RND2 (17q21.31)SERINC3 (20q13.12) / RND2 (17q21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RND2   18315
Cards
Entrez_Gene (NCBI)RND2  8153  Rho family GTPase 2
AliasesARHN; RHO7; RhoN
GeneCards (Weizmann)RND2
Ensembl hg19 (Hinxton)ENSG00000108830 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000108830 [Gene_View]  chr17:43025241-43032041 [Contig_View]  RND2 [Vega]
ICGC DataPortalENSG00000108830
TCGA cBioPortalRND2
AceView (NCBI)RND2
Genatlas (Paris)RND2
WikiGenes8153
SOURCE (Princeton)RND2
Genetics Home Reference (NIH)RND2
Genomic and cartography
GoldenPath hg38 (UCSC)RND2  -     chr17:43025241-43032041 +  17q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RND2  -     17q21.31   [Description]    (hg19-Feb_2009)
EnsemblRND2 - 17q21.31 [CytoView hg19]  RND2 - 17q21.31 [CytoView hg38]
Mapping of homologs : NCBIRND2 [Mapview hg19]  RND2 [Mapview hg38]
OMIM601555   
Gene and transcription
Genbank (Entrez)AB209778 AF498968 AK096367 AK290199 BC018096
RefSeq transcript (Entrez)NM_005440
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RND2
Cluster EST : UnigeneHs.603111 [ NCBI ]
CGAP (NCI)Hs.603111
Alternative Splicing GalleryENSG00000108830
Gene ExpressionRND2 [ NCBI-GEO ]   RND2 [ EBI - ARRAY_EXPRESS ]   RND2 [ SEEK ]   RND2 [ MEM ]
Gene Expression Viewer (FireBrowse)RND2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8153
GTEX Portal (Tissue expression)RND2
Protein : pattern, domain, 3D structure
UniProt/SwissProtP52198   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP52198  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP52198
Splice isoforms : SwissVarP52198
PhosPhoSitePlusP52198
Domaine pattern : Prosite (Expaxy)RHO (PS51420)   
Domains : Interpro (EBI)P-loop_NTPase    Small_GTP-bd_dom    Small_GTPase   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Conserved Domain (NCBI)RND2
DMDM Disease mutations8153
Blocks (Seattle)RND2
SuperfamilyP52198
Human Protein AtlasENSG00000108830
Peptide AtlasP52198
HPRD03332
IPIIPI00001436   IPI01015542   
Protein Interaction databases
DIP (DOE-UCLA)P52198
IntAct (EBI)P52198
FunCoupENSG00000108830
BioGRIDRND2
STRING (EMBL)RND2
ZODIACRND2
Ontologies - Pathways
QuickGOP52198
Ontology : AmiGOacrosomal membrane  GTPase activity  protein binding  GTP binding  early endosome  signal transduction  small GTPase mediated signal transduction  protein N-terminus binding  positive regulation of collateral sprouting  
Ontology : EGO-EBIacrosomal membrane  GTPase activity  protein binding  GTP binding  early endosome  signal transduction  small GTPase mediated signal transduction  protein N-terminus binding  positive regulation of collateral sprouting  
NDEx NetworkRND2
Atlas of Cancer Signalling NetworkRND2
Wikipedia pathwaysRND2
Orthology - Evolution
OrthoDB8153
GeneTree (enSembl)ENSG00000108830
Phylogenetic Trees/Animal Genes : TreeFamRND2
HOVERGENP52198
HOGENOMP52198
Homologs : HomoloGeneRND2
Homology/Alignments : Family Browser (UCSC)RND2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRND2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RND2
dbVarRND2
ClinVarRND2
1000_GenomesRND2 
Exome Variant ServerRND2
ExAC (Exome Aggregation Consortium)RND2 (select the gene name)
Genetic variants : HAPMAP8153
Genomic Variants (DGV)RND2 [DGVbeta]
DECIPHERRND2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRND2 
Mutations
ICGC Data PortalRND2 
TCGA Data PortalRND2 
Broad Tumor PortalRND2
OASIS PortalRND2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRND2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRND2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RND2
DgiDB (Drug Gene Interaction Database)RND2
DoCM (Curated mutations)RND2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RND2 (select a term)
intoGenRND2
Cancer3DRND2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601555   
Orphanet
MedgenRND2
Genetic Testing Registry RND2
NextProtP52198 [Medical]
TSGene8153
GENETestsRND2
Target ValidationRND2
Huge Navigator RND2 [HugePedia]
snp3D : Map Gene to Disease8153
BioCentury BCIQRND2
ClinGenRND2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8153
Chemical/Pharm GKB GenePA134936989
Clinical trialRND2
Miscellaneous
canSAR (ICR)RND2 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRND2
EVEXRND2
GoPubMedRND2
iHOPRND2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:38:50 CEST 2017

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