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RNF103-CHMP3 (RNF103-CHMP3 readthrough)

Identity

Alias_namesRNF103-VPS24
RNF103-VPS24 readthrough
Other alias
HGNC (Hugo) RNF103-CHMP3
LocusID (NCBI) 100526767
Atlas_Id 72680
Location 2p11.2  [Link to chromosome band 2p11]
Location_base_pair Starts at 86503430 and ends at 86721122 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DPYSL5 (2p23.3) / RNF103-CHMP3 (2p11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNF103-CHMP3   38847
Cards
Entrez_Gene (NCBI)RNF103-CHMP3  100526767  RNF103-CHMP3 readthrough
AliasesRNF103-VPS24
GeneCards (Weizmann)RNF103-CHMP3
Ensembl hg19 (Hinxton)ENSG00000115561 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000115561 [Gene_View]  chr2:86503430-86721122 [Contig_View]  RNF103-CHMP3 [Vega]
ICGC DataPortalENSG00000115561
TCGA cBioPortalRNF103-CHMP3
AceView (NCBI)RNF103-CHMP3
Genatlas (Paris)RNF103-CHMP3
WikiGenes100526767
SOURCE (Princeton)RNF103-CHMP3
Genetics Home Reference (NIH)RNF103-CHMP3
Genomic and cartography
GoldenPath hg38 (UCSC)RNF103-CHMP3  -     chr2:86503430-86721122 -  2p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNF103-CHMP3  -     2p11.2   [Description]    (hg19-Feb_2009)
EnsemblRNF103-CHMP3 - 2p11.2 [CytoView hg19]  RNF103-CHMP3 - 2p11.2 [CytoView hg38]
Mapping of homologs : NCBIRNF103-CHMP3 [Mapview hg19]  RNF103-CHMP3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK294389
RefSeq transcript (Entrez)NM_001198954
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNF103-CHMP3
Cluster EST : UnigeneHs.591582 [ NCBI ]
CGAP (NCI)Hs.591582
Alternative Splicing GalleryENSG00000115561
Gene ExpressionRNF103-CHMP3 [ NCBI-GEO ]   RNF103-CHMP3 [ EBI - ARRAY_EXPRESS ]   RNF103-CHMP3 [ SEEK ]   RNF103-CHMP3 [ MEM ]
Gene Expression Viewer (FireBrowse)RNF103-CHMP3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100526767
GTEX Portal (Tissue expression)RNF103-CHMP3
Human Protein AtlasENSG00000115561-RNF103-CHMP3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNF103-CHMP3
DMDM Disease mutations100526767
Blocks (Seattle)RNF103-CHMP3
Human Protein Atlas [tissue]ENSG00000115561-RNF103-CHMP3 [tissue]
Protein Interaction databases
FunCoupENSG00000115561
BioGRIDRNF103-CHMP3
STRING (EMBL)RNF103-CHMP3
ZODIACRNF103-CHMP3
Ontologies - Pathways
Huge Navigator RNF103-CHMP3 [HugePedia]
snp3D : Map Gene to Disease100526767
BioCentury BCIQRNF103-CHMP3
ClinGenRNF103-CHMP3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100526767
Clinical trialRNF103-CHMP3
Miscellaneous
canSAR (ICR)RNF103-CHMP3 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNF103-CHMP3
EVEXRNF103-CHMP3
GoPubMedRNF103-CHMP3
iHOPRNF103-CHMP3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:06:13 CET 2017

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