RNF138 (ring finger protein 138)

Identity

Other names	HSD-4
	MGC8758
	NARF
	STRIN
HGNC	RNF138
Location	18q12.1
Location_base_pair	Starts at 27925835 and ends at 27965522 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	RNF138   17765
Entrez_Gene	RNF138  51444  ring finger protein 138
	Cards
GeneCards	RNF138
Ensembl	ENSG00000134758 [Gene_View]  RNF138 [Vega]
Genatlas	RNF138
	Genomic and cartography
GoldenPath	RNF138  -  18q12.1   chr18:27925835-27965522 +  18q12.1   [Description]    (hg18-March_2006)
Ensembl	RNF138 - 18q12.1 [CytoView]
NCBI	Mapview
HomoloGene	RNF138
	Gene and transcription
Genbank	AF162680 [ ENTREZ ]
Genbank	AK023579 [ ENTREZ ]
Genbank	AK315761 [ ENTREZ ]
Genbank	AL133557 [ ENTREZ ]
Genbank	BC018107 [ ENTREZ ]
RefSeq	NM_016271 [ SRS ]    NM_016271 [ ENTREZ ]
RefSeq	NM_198128 [ SRS ]    NM_198128 [ ENTREZ ]
RefSeq	AC_000061 [ SRS ]    AC_000061 [ ENTREZ ]
RefSeq	AC_000150 [ SRS ]    AC_000150 [ ENTREZ ]
RefSeq	NC_000018 [ SRS ]    NC_000018 [ ENTREZ ]
RefSeq	NT_010966 [ SRS ]    NT_010966 [ ENTREZ ]
RefSeq	NW_001838467 [ SRS ]    NW_001838467 [ ENTREZ ]
RefSeq	NW_927095 [ SRS ]    NW_927095 [ ENTREZ ]
CCDS	RNF138 CCDS - NCBI
AceView	RNF138 AceView - NCBI
Unigene	Hs.302408 [ SRS ]    Hs.302408 [ NCBI ]
Fast-db	3201 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q8WVD3 [ SRS]    Q8WVD3 [ EXPASY ]     Q8WVD3 [ INTERPRO ]     Q8WVD3 [ UNIPROT ] Q8WVD3 [ VarSplice FASTA ]
Prosite	PS00518 ZF_RING_1 [ SRS ]    PS00518 ZF_RING_1 [ Expasy ]
Prosite	PS50089 ZF_RING_2 [ SRS ]    PS50089 ZF_RING_2 [ Expasy ]
Interpro	IPR015880 Znf_C2H2-like [ SRS ]    IPR015880 Znf_C2H2-like [ EBI ]
Interpro	IPR001841 Znf_RING [ SRS ]    IPR001841 Znf_RING [ EBI ]
Interpro	IPR013083 Znf_RING/FYVE/PHD [ SRS ]    IPR013083 Znf_RING/FYVE/PHD [ EBI ]
CluSTr	Q8WVD3
Pfam	PF00097 zf-C3HC4 [ SRS ]    PF00097 zf-C3HC4 [ Sanger ]    pfam00097 [ NCBI-CDD ]
Smart	SM00184 RING [EMBL]
Smart	SM00355 ZnF_C2H2 [EMBL]
Blocks	Q8WVD3
HPRD	11508
	Protein Interaction databases
DIP	Q8WVD3
IntAct	Q8WVD3
	Polymorphism : SNP, mutations, diseases
SNP	RNF138 [dbSNP-NCBI]
SNP	NM_016271 [SNP-NCI]
SNP	NM_198128 [SNP-NCI]
SNP	RNF138 [GeneSNPs - Utah]  RNF138] [HGBASE - SRS]
HAPMAP	RNF138 [HAPMAP]
COSMIC	RNF138 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	RNF138
Genetic Association	RNF138
CDC HuGE	RNF138
	General knowledge
Family Browser	RNF138 [UCSC Family Browser]
SOURCE	NM_016271
SOURCE	NM_198128
SMD	Hs.302408
SAGE	Hs.302408
Enzyme	6.3.2.- [ Enzyme-Expasy ]   6.3.2.- [ Enzyme-SRS ]   6.3.2.- [ IntEnz-EBI ]   6.3.2.- [ BRENDA ]   6.3.2.- [ KEGG ]
GO	protein binding [Amigo]  protein binding
GO	intracellular [Amigo]  intracellular
GO	zinc ion binding [Amigo]  zinc ion binding
GO	ligase activity [Amigo]  ligase activity
GO	metal ion binding [Amigo]  metal ion binding
PubGene	RNF138
TreeFam	RNF138
CTD	51444 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	RNF138 Related clones (RZPD - Berlin)
	PubMed
PubMed	7 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu Nov 27 14:09:07 2008