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RNF14 (ring finger protein 14)

Identity

Alias (NCBI)ARA54
HFB30
HRIHFB2038
TRIAD2
HGNC (Hugo) RNF14
HGNC Alias symbARA54
HFB30
TRIAD2
LocusID (NCBI) 9604
Atlas_Id 42130
Location 5q31.3  [Link to chromosome band 5q31]
Location_base_pair Starts at 141969105 and ends at 141990292 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CDC42 (1p36.12) / RNF14 (5q31.3)LOC100507412 (-) / RNF14 (5q31.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)RNF14   10058
Cards
Entrez_Gene (NCBI)RNF14    ring finger protein 14
AliasesARA54; HFB30; HRIHFB2038; TRIAD2
GeneCards (Weizmann)RNF14
Ensembl hg19 (Hinxton)ENSG00000013561 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000013561 [Gene_View]  ENSG00000013561 [Sequence]  chr5:141969105-141990292 [Contig_View]  RNF14 [Vega]
ICGC DataPortalENSG00000013561
TCGA cBioPortalRNF14
AceView (NCBI)RNF14
Genatlas (Paris)RNF14
SOURCE (Princeton)RNF14
Genetics Home Reference (NIH)RNF14
Genomic and cartography
GoldenPath hg38 (UCSC)RNF14  -     chr5:141969105-141990292 +  5q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNF14  -     5q31.3   [Description]    (hg19-Feb_2009)
GoldenPathRNF14 - 5q31.3 [CytoView hg19]  RNF14 - 5q31.3 [CytoView hg38]
ImmunoBaseENSG00000013561
Genome Data Viewer NCBIRNF14 [Mapview hg19]  
OMIM605675   
Gene and transcription
Genbank (Entrez)AA418072 AB015333 AB022663 AF060544 AK023698
RefSeq transcript (Entrez)NM_001201365 NM_004290 NM_183398 NM_183399 NM_183400 NM_183401
Consensus coding sequences : CCDS (NCBI)RNF14
Gene ExpressionRNF14 [ NCBI-GEO ]   RNF14 [ EBI - ARRAY_EXPRESS ]   RNF14 [ SEEK ]   RNF14 [ MEM ]
Gene Expression Viewer (FireBrowse)RNF14 [ Firebrowse - Broad ]
GenevisibleExpression of RNF14 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9604
GTEX Portal (Tissue expression)RNF14
Human Protein AtlasENSG00000013561-RNF14 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UBS8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UBS8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UBS8
PhosPhoSitePlusQ9UBS8
Domaine pattern : Prosite (Expaxy)RWD (PS50908)    TRIAD (PS51873)    ZF_RING_1 (PS00518)    ZF_RING_2 (PS50089)   
Domains : Interpro (EBI)E3_UB_ligase_RBR    IBR_dom    RNF14    RWD-domain    TRIAD_supradom    UBQ-conjugating_enzyme/RWD    Znf_RING    Znf_RING/FYVE/PHD    Znf_RING_CS   
Domain families : Pfam (Sanger)IBR (PF01485)    RWD (PF05773)   
Domain families : Pfam (NCBI)pfam01485    pfam05773   
Domain families : Smart (EMBL)IBR (SM00647)  RWD (SM00591)  
Conserved Domain (NCBI)RNF14
SuperfamilyQ9UBS8
AlphaFold pdb e-kbQ9UBS8   
Human Protein Atlas [tissue]ENSG00000013561-RNF14 [tissue]
HPRD05745
Protein Interaction databases
DIP (DOE-UCLA)Q9UBS8
IntAct (EBI)Q9UBS8
BioGRIDRNF14
STRING (EMBL)RNF14
ZODIACRNF14
Ontologies - Pathways
QuickGOQ9UBS8
Ontology : AmiGOubiquitin ligase complex  protein polyubiquitination  transcription coactivator activity  protein binding  nucleus  nucleoplasm  cytoplasm  cytoplasm  cytosol  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  ubiquitin-dependent protein catabolic process  signal transduction  protein ubiquitination  ubiquitin-like protein transferase activity  androgen receptor signaling pathway  ubiquitin conjugating enzyme binding  positive regulation of proteasomal ubiquitin-dependent protein catabolic process  positive regulation of transcription, DNA-templated  metal ion binding  androgen receptor binding  regulation of androgen receptor signaling pathway  ubiquitin protein ligase activity  
Ontology : EGO-EBIubiquitin ligase complex  protein polyubiquitination  transcription coactivator activity  protein binding  nucleus  nucleoplasm  cytoplasm  cytoplasm  cytosol  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  ubiquitin-dependent protein catabolic process  signal transduction  protein ubiquitination  ubiquitin-like protein transferase activity  androgen receptor signaling pathway  ubiquitin conjugating enzyme binding  positive regulation of proteasomal ubiquitin-dependent protein catabolic process  positive regulation of transcription, DNA-templated  metal ion binding  androgen receptor binding  regulation of androgen receptor signaling pathway  ubiquitin protein ligase activity  
NDEx NetworkRNF14
Atlas of Cancer Signalling NetworkRNF14
Wikipedia pathwaysRNF14
Orthology - Evolution
OrthoDB9604
GeneTree (enSembl)ENSG00000013561
Phylogenetic Trees/Animal Genes : TreeFamRNF14
Homologs : HomoloGeneRNF14
Homology/Alignments : Family Browser (UCSC)RNF14
Gene fusions - Rearrangements
Fusion : QuiverRNF14
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRNF14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RNF14
dbVarRNF14
ClinVarRNF14
MonarchRNF14
1000_GenomesRNF14 
Exome Variant ServerRNF14
GNOMAD BrowserENSG00000013561
Varsome BrowserRNF14
ACMGRNF14 variants
VarityQ9UBS8
Genomic Variants (DGV)RNF14 [DGVbeta]
DECIPHERRNF14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRNF14 
Mutations
ICGC Data PortalRNF14 
TCGA Data PortalRNF14 
Broad Tumor PortalRNF14
OASIS PortalRNF14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRNF14  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DRNF14
Mutations and Diseases : HGMDRNF14
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaRNF14
DgiDB (Drug Gene Interaction Database)RNF14
DoCM (Curated mutations)RNF14
CIViC (Clinical Interpretations of Variants in Cancer)RNF14
Cancer3DRNF14
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605675   
Orphanet
DisGeNETRNF14
MedgenRNF14
Genetic Testing Registry RNF14
NextProtQ9UBS8 [Medical]
GENETestsRNF14
Target ValidationRNF14
Huge Navigator RNF14 [HugePedia]
ClinGenRNF14
Clinical trials, drugs, therapy
MyCancerGenomeRNF14
Protein Interactions : CTDRNF14
Pharm GKB GenePA34423
PharosQ9UBS8
Clinical trialRNF14
Miscellaneous
canSAR (ICR)RNF14
HarmonizomeRNF14
DataMed IndexRNF14
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXRNF14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:29:11 CEST 2021

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