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RNF151 (ring finger protein 151)

Identity

Other alias-
HGNC (Hugo) RNF151
LocusID (NCBI) 146310
Atlas_Id 72690
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 1966823 and ends at 1968976 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNF151   23235
Cards
Entrez_Gene (NCBI)RNF151  146310  ring finger protein 151
Aliases
GeneCards (Weizmann)RNF151
Ensembl hg19 (Hinxton)ENSG00000179580 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000179580 [Gene_View]  chr16:1966823-1968976 [Contig_View]  RNF151 [Vega]
ICGC DataPortalENSG00000179580
TCGA cBioPortalRNF151
AceView (NCBI)RNF151
Genatlas (Paris)RNF151
WikiGenes146310
SOURCE (Princeton)RNF151
Genetics Home Reference (NIH)RNF151
Genomic and cartography
GoldenPath hg38 (UCSC)RNF151  -     chr16:1966823-1968976 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNF151  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblRNF151 - 16p13.3 [CytoView hg19]  RNF151 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBIRNF151 [Mapview hg19]  RNF151 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC029501 BC113014 BF057221 DB459461
RefSeq transcript (Entrez)NM_001348711 NM_174903
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNF151
Cluster EST : UnigeneHs.99354 [ NCBI ]
CGAP (NCI)Hs.99354
Alternative Splicing GalleryENSG00000179580
Gene ExpressionRNF151 [ NCBI-GEO ]   RNF151 [ EBI - ARRAY_EXPRESS ]   RNF151 [ SEEK ]   RNF151 [ MEM ]
Gene Expression Viewer (FireBrowse)RNF151 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)146310
GTEX Portal (Tissue expression)RNF151
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2KHN1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2KHN1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2KHN1
Splice isoforms : SwissVarQ2KHN1
PhosPhoSitePlusQ2KHN1
Domaine pattern : Prosite (Expaxy)ZF_RING_1 (PS00518)    ZF_RING_2 (PS50089)    ZF_SIAH (PS51081)    ZF_TRAF (PS50145)   
Domains : Interpro (EBI)SIAH-type    TRAF-like    Znf_RING    Znf_RING/FYVE/PHD    Znf_RING_CS    Znf_SIAH    Znf_TRAF   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)RING (SM00184)  
Conserved Domain (NCBI)RNF151
DMDM Disease mutations146310
Blocks (Seattle)RNF151
SuperfamilyQ2KHN1
Human Protein AtlasENSG00000179580
Peptide AtlasQ2KHN1
IPIIPI00399168   
Protein Interaction databases
DIP (DOE-UCLA)Q2KHN1
IntAct (EBI)Q2KHN1
FunCoupENSG00000179580
BioGRIDRNF151
STRING (EMBL)RNF151
ZODIACRNF151
Ontologies - Pathways
QuickGOQ2KHN1
Ontology : AmiGOnucleus  cytoplasm  spermatogenesis  zinc ion binding  cell differentiation  
Ontology : EGO-EBInucleus  cytoplasm  spermatogenesis  zinc ion binding  cell differentiation  
NDEx NetworkRNF151
Atlas of Cancer Signalling NetworkRNF151
Wikipedia pathwaysRNF151
Orthology - Evolution
OrthoDB146310
GeneTree (enSembl)ENSG00000179580
Phylogenetic Trees/Animal Genes : TreeFamRNF151
HOVERGENQ2KHN1
HOGENOMQ2KHN1
Homologs : HomoloGeneRNF151
Homology/Alignments : Family Browser (UCSC)RNF151
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRNF151 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RNF151
dbVarRNF151
ClinVarRNF151
1000_GenomesRNF151 
Exome Variant ServerRNF151
ExAC (Exome Aggregation Consortium)RNF151 (select the gene name)
Genetic variants : HAPMAP146310
Genomic Variants (DGV)RNF151 [DGVbeta]
DECIPHERRNF151 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRNF151 
Mutations
ICGC Data PortalRNF151 
TCGA Data PortalRNF151 
Broad Tumor PortalRNF151
OASIS PortalRNF151 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRNF151  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRNF151
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RNF151
DgiDB (Drug Gene Interaction Database)RNF151
DoCM (Curated mutations)RNF151 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RNF151 (select a term)
intoGenRNF151
Cancer3DRNF151(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenRNF151
Genetic Testing Registry RNF151
NextProtQ2KHN1 [Medical]
TSGene146310
GENETestsRNF151
Target ValidationRNF151
Huge Navigator RNF151 [HugePedia]
snp3D : Map Gene to Disease146310
BioCentury BCIQRNF151
ClinGenRNF151
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD146310
Chemical/Pharm GKB GenePA134992556
Clinical trialRNF151
Miscellaneous
canSAR (ICR)RNF151 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNF151
EVEXRNF151
GoPubMedRNF151
iHOPRNF151
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:36:25 CEST 2017

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