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RNF216-IT1 (RNF216 intronic transcript 1)

Identity

Alias_namesRNF216 intronic transcript 1 (non-protein coding)
Other alias-
HGNC (Hugo) RNF216-IT1
LocusID (NCBI) 100874342
Atlas_Id 72705
Location 7p22.1  [Link to chromosome band 7p22]
Location_base_pair Starts at 5702063 and ends at 5720092 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNF216-IT1   41463
Cards
Entrez_Gene (NCBI)RNF216-IT1  100874342  RNF216 intronic transcript 1
Aliases
GeneCards (Weizmann)RNF216-IT1
Ensembl hg19 (Hinxton) [Gene_View]  chr7:5702063-5720092 [Contig_View]  RNF216-IT1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:5702063-5720092 [Contig_View]  RNF216-IT1 [Vega]
TCGA cBioPortalRNF216-IT1
AceView (NCBI)RNF216-IT1
Genatlas (Paris)RNF216-IT1
WikiGenes100874342
SOURCE (Princeton)RNF216-IT1
Genetics Home Reference (NIH)RNF216-IT1
Genomic and cartography
GoldenPath hg19 (UCSC)RNF216-IT1  -     chr7:5702063-5720092 -  7p22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RNF216-IT1  -     7p22.1   [Description]    (hg38-Dec_2013)
EnsemblRNF216-IT1 - 7p22.1 [CytoView hg19]  RNF216-IT1 - 7p22.1 [CytoView hg38]
Mapping of homologs : NCBIRNF216-IT1 [Mapview hg19]  RNF216-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA825874 HG499982
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007819 NW_004929329
Consensus coding sequences : CCDS (NCBI)RNF216-IT1
Cluster EST : UnigeneHs.665728 [ NCBI ]
CGAP (NCI)Hs.665728
Gene ExpressionRNF216-IT1 [ NCBI-GEO ]   RNF216-IT1 [ EBI - ARRAY_EXPRESS ]   RNF216-IT1 [ SEEK ]   RNF216-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)RNF216-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874342
GTEX Portal (Tissue expression)RNF216-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNF216-IT1
DMDM Disease mutations100874342
Blocks (Seattle)RNF216-IT1
Protein Interaction databases
BioGRIDRNF216-IT1
STRING (EMBL)RNF216-IT1
ZODIACRNF216-IT1
Ontologies - Pathways
Huge Navigator RNF216-IT1 [HugePedia]
snp3D : Map Gene to Disease100874342
BioCentury BCIQRNF216-IT1
ClinGenRNF216-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874342
Clinical trialRNF216-IT1
Miscellaneous
canSAR (ICR)RNF216-IT1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNF216-IT1
EVEXRNF216-IT1
GoPubMedRNF216-IT1
iHOPRNF216-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:41:20 CET 2017

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