Atlas of Genetics and Cytogenetics in Oncology and Haematology

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RNF227 (ring finger protein 227)


Alias (NCBI)LINC02581
HGNC (Hugo) RNF227
LocusID (NCBI) 284023
Atlas_Id 80627
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7913324 and ends at 7916195 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

HGNC (Hugo)RNF227   27571
Entrez_Gene (NCBI)RNF227    ring finger protein 227
GeneCards (Weizmann)RNF227
Ensembl hg19 (Hinxton)ENSG00000179859 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000179859 [Gene_View]  ENSG00000179859 [Sequence]  chr17:7913324-7916195 [Contig_View]  RNF227 [Vega]
ICGC DataPortalENSG00000179859
TCGA cBioPortalRNF227
AceView (NCBI)RNF227
Genatlas (Paris)RNF227
SOURCE (Princeton)RNF227
Genetics Home Reference (NIH)RNF227
Genomic and cartography
GoldenPath hg38 (UCSC)RNF227  -     chr17:7913324-7916195 -  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNF227  -     17p13.1   [Description]    (hg19-Feb_2009)
GoldenPathRNF227 - 17p13.1 [CytoView hg19]  RNF227 - 17p13.1 [CytoView hg38]
genome Data Viewer NCBIRNF227 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK091084 AK095766
RefSeq transcript (Entrez)NM_001358699
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNF227
Alternative Splicing GalleryENSG00000179859
Gene ExpressionRNF227 [ NCBI-GEO ]   RNF227 [ EBI - ARRAY_EXPRESS ]   RNF227 [ SEEK ]   RNF227 [ MEM ]
Gene Expression Viewer (FireBrowse)RNF227 [ Firebrowse - Broad ]
GenevisibleExpression of RNF227 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284023
GTEX Portal (Tissue expression)RNF227
Human Protein AtlasENSG00000179859-RNF227 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNF227
Blocks (Seattle)RNF227
Human Protein Atlas [tissue]ENSG00000179859-RNF227 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:25:04 CET 2020

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