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RNF5P1 (ring finger protein 5 pseudogene 1)

Identity

Alias_namesring finger protein 5, E3 ubiquitin protein ligase pseudogene 1
Other alias-
HGNC (Hugo) RNF5P1
LocusID (NCBI) 286140
Atlas_Id 72715
Location 8p11.22  [Link to chromosome band 8p11]
Location_base_pair Starts at 38600175 and ends at 38601257 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNF5P1   31053
Cards
Entrez_Gene (NCBI)RNF5P1  286140  ring finger protein 5 pseudogene 1
Aliases
GeneCards (Weizmann)RNF5P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:38600175-38601257 [Contig_View]  RNF5P1 [Vega]
TCGA cBioPortalRNF5P1
AceView (NCBI)RNF5P1
Genatlas (Paris)RNF5P1
WikiGenes286140
SOURCE (Princeton)RNF5P1
Genetics Home Reference (NIH)RNF5P1
Genomic and cartography
GoldenPath hg38 (UCSC)RNF5P1  -     chr8:38600175-38601257 -  8p11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNF5P1  -     8p11.22   [Description]    (hg19-Feb_2009)
EnsemblRNF5P1 - 8p11.22 [CytoView hg19]  RNF5P1 - 8p11.22 [CytoView hg38]
Mapping of homologs : NCBIRNF5P1 [Mapview hg19]  RNF5P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG315135
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNF5P1
Cluster EST : UnigeneHs.512071 [ NCBI ]
CGAP (NCI)Hs.512071
Gene ExpressionRNF5P1 [ NCBI-GEO ]   RNF5P1 [ EBI - ARRAY_EXPRESS ]   RNF5P1 [ SEEK ]   RNF5P1 [ MEM ]
Gene Expression Viewer (FireBrowse)RNF5P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)286140
GTEX Portal (Tissue expression)RNF5P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNF5P1
DMDM Disease mutations286140
Blocks (Seattle)RNF5P1
Protein Interaction databases
BioGRIDRNF5P1
STRING (EMBL)RNF5P1
ZODIACRNF5P1
Ontologies - Pathways
Huge Navigator RNF5P1 [HugePedia]
snp3D : Map Gene to Disease286140
BioCentury BCIQRNF5P1
ClinGenRNF5P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD286140
Chemical/Pharm GKB GenePA142671061
Clinical trialRNF5P1
Miscellaneous
canSAR (ICR)RNF5P1 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNF5P1
EVEXRNF5P1
GoPubMedRNF5P1
iHOPRNF5P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:18:54 CET 2017

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