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RNU1-1 (RNA, U1 small nuclear 1)

Identity

Alias_namesRNU1
RNU1G4
RNU1A3
RNU1A
RNA, U1G4 small nuclear
RNA, U1A3 small nuclear
RNA, U1A small nuclear
Alias_symbol (synonym)Rnu1a1
U1
HU1-1
U1A1
HSD1
Other alias
HGNC (Hugo) RNU1-1
LocusID (NCBI) 26871
Atlas_Id 79247
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 143729407 and ends at 143729570 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNU1-1   10120
Cards
Entrez_Gene (NCBI)RNU1-1  26871  RNA, U1 small nuclear 1
AliasesHSD1; HU1-1; RNU1; RNU1A; 
RNU1A3; RNU1G4; Rnu1a1; U1; U1A1
GeneCards (Weizmann)RNU1-1
Ensembl hg19 (Hinxton)ENSG00000206652 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000206652 [Gene_View]  chr1:143729407-143729570 [Contig_View]  RNU1-1 [Vega]
ICGC DataPortalENSG00000206652
TCGA cBioPortalRNU1-1
AceView (NCBI)RNU1-1
Genatlas (Paris)RNU1-1
WikiGenes26871
SOURCE (Princeton)RNU1-1
Genetics Home Reference (NIH)RNU1-1
Genomic and cartography
GoldenPath hg38 (UCSC)RNU1-1  -     chr1:143729407-143729570 -  1q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNU1-1  -     1q21.1   [Description]    (hg19-Feb_2009)
EnsemblRNU1-1 - 1q21.1 [CytoView hg19]  RNU1-1 - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBIRNU1-1 [Mapview hg19]  RNU1-1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNU1-1
Alternative Splicing GalleryENSG00000206652
Gene ExpressionRNU1-1 [ NCBI-GEO ]   RNU1-1 [ EBI - ARRAY_EXPRESS ]   RNU1-1 [ SEEK ]   RNU1-1 [ MEM ]
Gene Expression Viewer (FireBrowse)RNU1-1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26871
GTEX Portal (Tissue expression)RNU1-1
Human Protein AtlasENSG00000206652-RNU1-1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNU1-1
DMDM Disease mutations26871
Blocks (Seattle)RNU1-1
Human Protein Atlas [tissue]ENSG00000206652-RNU1-1 [tissue]
Protein Interaction databases
FunCoupENSG00000206652
BioGRIDRNU1-1
STRING (EMBL)RNU1-1
ZODIACRNU1-1
Ontologies - Pathways
Huge Navigator RNU1-1 [HugePedia]
snp3D : Map Gene to Disease26871
BioCentury BCIQRNU1-1
ClinGenRNU1-1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26871
Chemical/Pharm GKB GenePA34487
Clinical trialRNU1-1
Miscellaneous
canSAR (ICR)RNU1-1 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNU1-1
EVEXRNU1-1
GoPubMedRNU1-1
iHOPRNU1-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:02:38 CET 2017

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