Atlas of Genetics and Cytogenetics in Oncology and Haematology


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RNU1-2 (RNA, U1 small nuclear 2)

Identity

Alias_namesRNU1C1
RNU1C2
RNA, U1C1 small nuclear
RNA, U1C2 small nuclear
Alias_symbol (synonym)U1C1
U1C21
Other alias
HGNC (Hugo) RNU1-2
LocusID (NCBI) 26870
Atlas_Id 80134
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 143729407 and ends at 143729570 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNU1-2   10123
Cards
Entrez_Gene (NCBI)RNU1-2  26870  RNA, U1 small nuclear 2
AliasesRNU1C1; RNU1C2; U1C1; U1C21
GeneCards (Weizmann)RNU1-2
Ensembl hg19 (Hinxton)ENSG00000207005 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207005 [Gene_View]  chr1:143729407-143729570 [Contig_View]  RNU1-2 [Vega]
ICGC DataPortalENSG00000207005
TCGA cBioPortalRNU1-2
AceView (NCBI)RNU1-2
Genatlas (Paris)RNU1-2
WikiGenes26870
SOURCE (Princeton)RNU1-2
Genetics Home Reference (NIH)RNU1-2
Genomic and cartography
GoldenPath hg38 (UCSC)RNU1-2  -     chr1:143729407-143729570 -  1q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNU1-2  -     1q21.1   [Description]    (hg19-Feb_2009)
EnsemblRNU1-2 - 1q21.1 [CytoView hg19]  RNU1-2 - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBIRNU1-2 [Mapview hg19]  RNU1-2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNU1-2
Alternative Splicing GalleryENSG00000207005
Gene ExpressionRNU1-2 [ NCBI-GEO ]   RNU1-2 [ EBI - ARRAY_EXPRESS ]   RNU1-2 [ SEEK ]   RNU1-2 [ MEM ]
Gene Expression Viewer (FireBrowse)RNU1-2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26870
GTEX Portal (Tissue expression)RNU1-2
Human Protein AtlasENSG00000207005-RNU1-2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNU1-2
DMDM Disease mutations26870
Blocks (Seattle)RNU1-2
Human Protein Atlas [tissue]ENSG00000207005-RNU1-2 [tissue]
Protein Interaction databases
FunCoupENSG00000207005
BioGRIDRNU1-2
STRING (EMBL)RNU1-2
ZODIACRNU1-2
Ontologies - Pathways
Huge Navigator RNU1-2 [HugePedia]
snp3D : Map Gene to Disease26870
BioCentury BCIQRNU1-2
ClinGenRNU1-2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26870
Chemical/Pharm GKB GenePA34489
Clinical trialRNU1-2
Miscellaneous
canSAR (ICR)RNU1-2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNU1-2
EVEXRNU1-2
GoPubMedRNU1-2
iHOPRNU1-2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:02:38 CET 2017

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