Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

RNU1-3 (RNA, U1 small nuclear 3)

Identity

Alias_namesRNU1G3
RNA, U1G3 small nuclear
Alias_symbol (synonym)HSD4
Other alias
HGNC (Hugo) RNU1-3
LocusID (NCBI) 26869
Atlas_Id 78990
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 143729407 and ends at 143729570 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNU1-3   10130
Cards
Entrez_Gene (NCBI)RNU1-3  26869  RNA, U1 small nuclear 3
AliasesHSD4; RNU1G3
GeneCards (Weizmann)RNU1-3
Ensembl hg19 (Hinxton)ENSG00000207513 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207513 [Gene_View]  chr1:143729407-143729570 [Contig_View]  RNU1-3 [Vega]
ICGC DataPortalENSG00000207513
TCGA cBioPortalRNU1-3
AceView (NCBI)RNU1-3
Genatlas (Paris)RNU1-3
WikiGenes26869
SOURCE (Princeton)RNU1-3
Genetics Home Reference (NIH)RNU1-3
Genomic and cartography
GoldenPath hg38 (UCSC)RNU1-3  -     chr1:143729407-143729570 -  1q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNU1-3  -     1q21.1   [Description]    (hg19-Feb_2009)
EnsemblRNU1-3 - 1q21.1 [CytoView hg19]  RNU1-3 - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBIRNU1-3 [Mapview hg19]  RNU1-3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNU1-3
Alternative Splicing GalleryENSG00000207513
Gene ExpressionRNU1-3 [ NCBI-GEO ]   RNU1-3 [ EBI - ARRAY_EXPRESS ]   RNU1-3 [ SEEK ]   RNU1-3 [ MEM ]
Gene Expression Viewer (FireBrowse)RNU1-3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26869
GTEX Portal (Tissue expression)RNU1-3
Human Protein AtlasENSG00000207513-RNU1-3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNU1-3
DMDM Disease mutations26869
Blocks (Seattle)RNU1-3
Human Protein Atlas [tissue]ENSG00000207513-RNU1-3 [tissue]
Protein Interaction databases
FunCoupENSG00000207513
BioGRIDRNU1-3
STRING (EMBL)RNU1-3
ZODIACRNU1-3
Ontologies - Pathways
Huge Navigator RNU1-3 [HugePedia]
snp3D : Map Gene to Disease26869
BioCentury BCIQRNU1-3
ClinGenRNU1-3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26869
Chemical/Pharm GKB GenePA34490
Clinical trialRNU1-3
Miscellaneous
canSAR (ICR)RNU1-3 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNU1-3
EVEXRNU1-3
GoPubMedRNU1-3
iHOPRNU1-3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:02:38 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.