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RNU1-4 (RNA, U1 small nuclear 4)

Identity

Alias (NCBI)HSD2
HSD5
HSD6
HSD7
RNU1
RNU1D2
RNU1E2
RNU1F1
RNU1G1
RNU1G2
U1B2
U1D2
U1E2
U1F
HGNC (Hugo) RNU1-4
HGNC Alias symbHSD6
U1E2
HSD2
U1D2
HSD5
U1B2
U1F
HSD7
HGNC Previous nameRNU1E2
 RNU1G2
 RNU1D2
 RNU1F1
 RNU1G1
HGNC Previous nameRNA, U1E2 small nuclear
 RNA, U1G2 small nuclear
 RNA, U1D2 small nuclear
 RNA, U1F1 small nuclear
 RNA, U1G1 small nuclear
LocusID (NCBI) 6060
Atlas_Id 79474
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 143729407 and ends at 143729570 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNU1-4   10128
Cards
Entrez_Gene (NCBI)RNU1-4  6060  RNA, U1 small nuclear 4
AliasesHSD2; HSD5; HSD6; HSD7; 
RNU1; RNU1D2; RNU1E2; RNU1F1; RNU1G1; RNU1G2; U1B2; U1D2; U1E2; U1F
GeneCards (Weizmann)RNU1-4
Ensembl hg19 (Hinxton)ENSG00000207389 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207389 [Gene_View]  ENSG00000207389 [Sequence]  chr1:143729407-143729570 [Contig_View]  RNU1-4 [Vega]
ICGC DataPortalENSG00000207389
TCGA cBioPortalRNU1-4
AceView (NCBI)RNU1-4
Genatlas (Paris)RNU1-4
WikiGenes6060
SOURCE (Princeton)RNU1-4
Genetics Home Reference (NIH)RNU1-4
Genomic and cartography
GoldenPath hg38 (UCSC)RNU1-4  -     chr1:143729407-143729570 -  1q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNU1-4  -     1q21.1   [Description]    (hg19-Feb_2009)
GoldenPathRNU1-4 - 1q21.1 [CytoView hg19]  RNU1-4 - 1q21.1 [CytoView hg38]
ImmunoBaseENSG00000207389
genome Data Viewer NCBIRNU1-4 [Mapview hg19]  
OMIM180680   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNU1-4
Alternative Splicing GalleryENSG00000207389
Gene ExpressionRNU1-4 [ NCBI-GEO ]   RNU1-4 [ EBI - ARRAY_EXPRESS ]   RNU1-4 [ SEEK ]   RNU1-4 [ MEM ]
Gene Expression Viewer (FireBrowse)RNU1-4 [ Firebrowse - Broad ]
GenevisibleExpression of RNU1-4 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6060
GTEX Portal (Tissue expression)RNU1-4
Human Protein AtlasENSG00000207389-RNU1-4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNU1-4
DMDM Disease mutations6060
Blocks (Seattle)RNU1-4
Human Protein Atlas [tissue]ENSG00000207389-RNU1-4 [tissue]
Protein Interaction databases
FunCoupENSG00000207389
BioGRIDRNU1-4
STRING (EMBL)RNU1-4
ZODIACRNU1-4
Ontologies - Pathways
Huge Navigator RNU1-4 [HugePedia]
snp3D : Map Gene to Disease6060
BioCentury BCIQRNU1-4
ClinGenRNU1-4
Clinical trials, drugs, therapy
Protein Interactions : CTD6060
Pharm GKB GenePA34486
Clinical trialRNU1-4
Miscellaneous
canSAR (ICR)RNU1-4 (select the gene name)
HarmonizomeRNU1-4
DataMed IndexRNU1-4
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNU1-4
EVEXRNU1-4
GoPubMedRNU1-4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:33:08 CEST 2020

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