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RNU1-4 (RNA, U1 small nuclear 4)

Identity

Alias_namesRNU1E2
RNU1G2
RNU1D2
RNU1F1
RNU1G1
RNA, U1E2 small nuclear
RNA, U1G2 small nuclear
RNA, U1D2 small nuclear
RNA, U1F1 small nuclear
RNA, U1G1 small nuclear
Alias_symbol (synonym)HSD6
U1E2
HSD2
U1D2
HSD5
U1B2
U1F
HSD7
Other aliasRNU1
HGNC (Hugo) RNU1-4
LocusID (NCBI) 6060
Atlas_Id 79474
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 143729407 and ends at 143729570 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNU1-4   10128
Cards
Entrez_Gene (NCBI)RNU1-4  6060  RNA, U1 small nuclear 4
AliasesHSD2; HSD5; HSD6; HSD7; 
RNU1; RNU1D2; RNU1E2; RNU1F1; RNU1G1; RNU1G2; U1B2; U1D2; U1E2; U1F
GeneCards (Weizmann)RNU1-4
Ensembl hg19 (Hinxton)ENSG00000207389 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207389 [Gene_View]  chr1:143729407-143729570 [Contig_View]  RNU1-4 [Vega]
ICGC DataPortalENSG00000207389
TCGA cBioPortalRNU1-4
AceView (NCBI)RNU1-4
Genatlas (Paris)RNU1-4
WikiGenes6060
SOURCE (Princeton)RNU1-4
Genetics Home Reference (NIH)RNU1-4
Genomic and cartography
GoldenPath hg38 (UCSC)RNU1-4  -     chr1:143729407-143729570 -  1q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNU1-4  -     1q21.1   [Description]    (hg19-Feb_2009)
EnsemblRNU1-4 - 1q21.1 [CytoView hg19]  RNU1-4 - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBIRNU1-4 [Mapview hg19]  RNU1-4 [Mapview hg38]
OMIM180680   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNU1-4
Alternative Splicing GalleryENSG00000207389
Gene ExpressionRNU1-4 [ NCBI-GEO ]   RNU1-4 [ EBI - ARRAY_EXPRESS ]   RNU1-4 [ SEEK ]   RNU1-4 [ MEM ]
Gene Expression Viewer (FireBrowse)RNU1-4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)6060
GTEX Portal (Tissue expression)RNU1-4
Human Protein AtlasENSG00000207389-RNU1-4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNU1-4
DMDM Disease mutations6060
Blocks (Seattle)RNU1-4
Human Protein Atlas [tissue]ENSG00000207389-RNU1-4 [tissue]
Protein Interaction databases
FunCoupENSG00000207389
BioGRIDRNU1-4
STRING (EMBL)RNU1-4
ZODIACRNU1-4
Ontologies - Pathways
Huge Navigator RNU1-4 [HugePedia]
snp3D : Map Gene to Disease6060
BioCentury BCIQRNU1-4
ClinGenRNU1-4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6060
Chemical/Pharm GKB GenePA34486
Clinical trialRNU1-4
Miscellaneous
canSAR (ICR)RNU1-4 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNU1-4
EVEXRNU1-4
GoPubMedRNU1-4
iHOPRNU1-4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:02:39 CET 2017

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