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RNU11 (RNA, U11 small nuclear)

Identity

Alias_symbol (synonym)U11
RNU11-1
Other alias
HGNC (Hugo) RNU11
LocusID (NCBI) 26824
Atlas_Id 72724
Location 1p35.3  [Link to chromosome band 1p35]
Location_base_pair Starts at 28648600 and ends at 28648734 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
RNU11 (1p35.3) / GRN (17q21.31)RNU11 (1p35.3) / HBS1L (6q23.3)RNU11 (1p35.3) / SHISA5 (3p21.31)
RNU11 (1p35.3) / ZNF26 (12q24.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNU11   10108
Cards
Entrez_Gene (NCBI)RNU11  26824  RNA, U11 small nuclear
AliasesRNU11-1; U11
GeneCards (Weizmann)RNU11
Ensembl hg19 (Hinxton)ENSG00000270103 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000270103 [Gene_View]  chr1:28648600-28648734 [Contig_View]  RNU11 [Vega]
ICGC DataPortalENSG00000270103
TCGA cBioPortalRNU11
AceView (NCBI)RNU11
Genatlas (Paris)RNU11
WikiGenes26824
SOURCE (Princeton)RNU11
Genetics Home Reference (NIH)RNU11
Genomic and cartography
GoldenPath hg38 (UCSC)RNU11  -     chr1:28648600-28648734 +  1p35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNU11  -     1p35.3   [Description]    (hg19-Feb_2009)
EnsemblRNU11 - 1p35.3 [CytoView hg19]  RNU11 - 1p35.3 [CytoView hg38]
Mapping of homologs : NCBIRNU11 [Mapview hg19]  RNU11 [Mapview hg38]
Gene and transcription
Genbank (Entrez)J04118
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNU11
Cluster EST : UnigeneHs.640266 [ NCBI ]
CGAP (NCI)Hs.640266
Alternative Splicing GalleryENSG00000270103
Gene ExpressionRNU11 [ NCBI-GEO ]   RNU11 [ EBI - ARRAY_EXPRESS ]   RNU11 [ SEEK ]   RNU11 [ MEM ]
Gene Expression Viewer (FireBrowse)RNU11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26824
GTEX Portal (Tissue expression)RNU11
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNU11
DMDM Disease mutations26824
Blocks (Seattle)RNU11
Human Protein AtlasENSG00000270103
Protein Interaction databases
FunCoupENSG00000270103
BioGRIDRNU11
STRING (EMBL)RNU11
ZODIACRNU11
Ontologies - Pathways
Huge Navigator RNU11 [HugePedia]
snp3D : Map Gene to Disease26824
BioCentury BCIQRNU11
ClinGenRNU11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26824
Chemical/Pharm GKB GenePA34473
Clinical trialRNU11
Miscellaneous
canSAR (ICR)RNU11 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNU11
EVEXRNU11
GoPubMedRNU11
iHOPRNU11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:38:58 CEST 2017

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