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RNU12 (RNA, U12 small nuclear)

Identity

Alias (NCBI)RNU12-1
RNU12L
RNU12P
dJ222E13.7
HGNC (Hugo) RNU12
HGNC Alias symbRNU12-1
HGNC Alias nameRNA, U12 small nuclear 1
HGNC Previous nameRNU12P
HGNC Previous nameRNA, U12 small nuclear pseudogene
LocusID (NCBI) 267010
Atlas_Id 72726
Location 22q13.2  [Link to chromosome band 22q13]
Location_base_pair Starts at 42615245 and ends at 42615393 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
RNU12 (22q13.2) / HSPA8 (11q24.1)RNU12 (22q13.2) / PLP1 (Xq22.2)RNU12 (22q13.2) / RNPS1 (16p13.3)
RNU12 (22q13.2) / TRO (Xp11.21)RNU12 (22q13.2) / ZNF239 (10q11.21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNU12   19380
Cards
Entrez_Gene (NCBI)RNU12  267010  RNA, U12 small nuclear
AliasesRNU12-1; RNU12L; RNU12P; dJ222E13.7
GeneCards (Weizmann)RNU12
Ensembl hg19 (Hinxton)ENSG00000276027 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000276027 [Gene_View]  ENSG00000276027 [Sequence]  chr22:42615245-42615393 [Contig_View]  RNU12 [Vega]
ICGC DataPortalENSG00000276027
TCGA cBioPortalRNU12
AceView (NCBI)RNU12
Genatlas (Paris)RNU12
WikiGenes267010
SOURCE (Princeton)RNU12
Genetics Home Reference (NIH)RNU12
Genomic and cartography
GoldenPath hg38 (UCSC)RNU12  -     chr22:42615245-42615393 +  22q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNU12  -     22q13.2   [Description]    (hg19-Feb_2009)
GoldenPathRNU12 - 22q13.2 [CytoView hg19]  RNU12 - 22q13.2 [CytoView hg38]
ImmunoBaseENSG00000276027
genome Data Viewer NCBIRNU12 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)J04119
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNU12
Alternative Splicing GalleryENSG00000276027
Gene ExpressionRNU12 [ NCBI-GEO ]   RNU12 [ EBI - ARRAY_EXPRESS ]   RNU12 [ SEEK ]   RNU12 [ MEM ]
Gene Expression Viewer (FireBrowse)RNU12 [ Firebrowse - Broad ]
GenevisibleExpression of RNU12 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)267010
GTEX Portal (Tissue expression)RNU12
Human Protein AtlasENSG00000276027-RNU12 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNU12
DMDM Disease mutations267010
Blocks (Seattle)RNU12
Human Protein Atlas [tissue]ENSG00000276027-RNU12 [tissue]
Protein Interaction databases
FunCoupENSG00000276027
BioGRIDRNU12
STRING (EMBL)RNU12
ZODIACRNU12
Ontologies - Pathways
Huge Navigator RNU12 [HugePedia]
snp3D : Map Gene to Disease267010
BioCentury BCIQRNU12
ClinGenRNU12
Clinical trials, drugs, therapy
Protein Interactions : CTD267010
Pharm GKB GenePA34474
Clinical trialRNU12
Miscellaneous
canSAR (ICR)RNU12 (select the gene name)
HarmonizomeRNU12
DataMed IndexRNU12
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNU12
EVEXRNU12
GoPubMedRNU12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 16:25:43 CEST 2020

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