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RNU12 (RNA, U12 small nuclear)

Identity

Alias_namesRNU12P
RNA, U12 small nuclear pseudogene
Alias_symbol (synonym)RNU12-1
Other aliasRNU12L
dJ222E13.7
HGNC (Hugo) RNU12
LocusID (NCBI) 267010
Atlas_Id 72726
Location 22q13.2  [Link to chromosome band 22q13]
Location_base_pair Starts at 43011251 and ends at 43011399 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
RNU12 (22q13.2) / HSPA8 (11q24.1)RNU12 (22q13.2) / PLP1 (Xq22.2)RNU12 (22q13.2) / RNPS1 (16p13.3)
RNU12 (22q13.2) / TRO (Xp11.21)RNU12 (22q13.2) / ZNF239 (10q11.21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNU12   19380
Cards
Entrez_Gene (NCBI)RNU12  267010  RNA, U12 small nuclear
AliasesRNU12-1; RNU12L; RNU12P; dJ222E13.7
GeneCards (Weizmann)RNU12
Ensembl hg19 (Hinxton)ENSG00000276027 [Gene_View]  chr22:43011251-43011399 [Contig_View]  RNU12 [Vega]
Ensembl hg38 (Hinxton)ENSG00000276027 [Gene_View]  chr22:43011251-43011399 [Contig_View]  RNU12 [Vega]
ICGC DataPortalENSG00000276027
TCGA cBioPortalRNU12
AceView (NCBI)RNU12
Genatlas (Paris)RNU12
WikiGenes267010
SOURCE (Princeton)RNU12
Genetics Home Reference (NIH)RNU12
Genomic and cartography
GoldenPath hg19 (UCSC)RNU12  -     chr22:43011251-43011399 +  22q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RNU12  -     22q13.2   [Description]    (hg38-Dec_2013)
EnsemblRNU12 - 22q13.2 [CytoView hg19]  RNU12 - 22q13.2 [CytoView hg38]
Mapping of homologs : NCBIRNU12 [Mapview hg19]  RNU12 [Mapview hg38]
Gene and transcription
Genbank (Entrez)J04119
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000022 NC_018933 NG_002405 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)RNU12
Cluster EST : UnigeneHs.574857 [ NCBI ]
CGAP (NCI)Hs.574857
Alternative Splicing GalleryENSG00000276027
Gene ExpressionRNU12 [ NCBI-GEO ]   RNU12 [ EBI - ARRAY_EXPRESS ]   RNU12 [ SEEK ]   RNU12 [ MEM ]
Gene Expression Viewer (FireBrowse)RNU12 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)267010
GTEX Portal (Tissue expression)RNU12
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNU12
DMDM Disease mutations267010
Blocks (Seattle)RNU12
Human Protein AtlasENSG00000276027
Protein Interaction databases
FunCoupENSG00000276027
BioGRIDRNU12
STRING (EMBL)RNU12
ZODIACRNU12
Ontologies - Pathways
Huge Navigator RNU12 [HugePedia]
snp3D : Map Gene to Disease267010
BioCentury BCIQRNU12
ClinGenRNU12
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD267010
Chemical/Pharm GKB GenePA34474
Clinical trialRNU12
Miscellaneous
canSAR (ICR)RNU12 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNU12
EVEXRNU12
GoPubMedRNU12
iHOPRNU12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:41:23 CET 2017

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