Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

RNU2-1 (RNA, U2 small nuclear 1)

Identity

Alias_symbol (synonym)U2
Other aliasRNU2
HGNC (Hugo) RNU2-1
LocusID (NCBI) 6066
Atlas_Id 53594
Location 17q21.31  [Link to chromosome band 17q21]
Location_base_pair Starts at 43233790 and ends at 43233977 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNU2-1   10142
Cards
Entrez_Gene (NCBI)RNU2-1  6066  RNA, U2 small nuclear 1
AliasesRNU2; U2
GeneCards (Weizmann)RNU2-1
Ensembl hg19 (Hinxton)ENSG00000274585 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000274585 [Gene_View]  chr17:43233790-43233977 [Contig_View]  RNU2-1 [Vega]
ICGC DataPortalENSG00000274585
TCGA cBioPortalRNU2-1
AceView (NCBI)RNU2-1
Genatlas (Paris)RNU2-1
WikiGenes6066
SOURCE (Princeton)RNU2-1
Genetics Home Reference (NIH)RNU2-1
Genomic and cartography
GoldenPath hg38 (UCSC)RNU2-1  -     chr17:43233790-43233977 -  17q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNU2-1  -     17q21.31   [Description]    (hg19-Feb_2009)
EnsemblRNU2-1 - 17q21.31 [CytoView hg19]  RNU2-1 - 17q21.31 [CytoView hg38]
Mapping of homologs : NCBIRNU2-1 [Mapview hg19]  RNU2-1 [Mapview hg38]
OMIM180690   
Gene and transcription
Genbank (Entrez)X59360
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNU2-1
Alternative Splicing GalleryENSG00000274585
Gene ExpressionRNU2-1 [ NCBI-GEO ]   RNU2-1 [ EBI - ARRAY_EXPRESS ]   RNU2-1 [ SEEK ]   RNU2-1 [ MEM ]
Gene Expression Viewer (FireBrowse)RNU2-1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)6066
GTEX Portal (Tissue expression)RNU2-1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNU2-1
DMDM Disease mutations6066
Blocks (Seattle)RNU2-1
Human Protein AtlasENSG00000274585
Protein Interaction databases
FunCoupENSG00000274585
BioGRIDRNU2-1
STRING (EMBL)RNU2-1
ZODIACRNU2-1
Ontologies - Pathways
Huge Navigator RNU2-1 [HugePedia]
snp3D : Map Gene to Disease6066
BioCentury BCIQRNU2-1
ClinGenRNU2-1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6066
Chemical/Pharm GKB GenePA162401971
Clinical trialRNU2-1
Miscellaneous
canSAR (ICR)RNU2-1 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNU2-1
EVEXRNU2-1
GoPubMedRNU2-1
iHOPRNU2-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:53:40 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.